Natrinema pellirubrum: Natpe_1167
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Entry
Natpe_1167 CDS
T02425
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
npe
Natrinema pellirubrum
Pathway
npe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Natpe_1167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npe03019
]
Natpe_1167
03009 Ribosome biogenesis [BR:
npe03009
]
Natpe_1167
04131 Membrane trafficking [BR:
npe04131
]
Natpe_1167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npe04147
]
Natpe_1167
Messenger RNA biogenesis [BR:
npe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natpe_1167
Ribosome biogenesis [BR:
npe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natpe_1167
Membrane trafficking [BR:
npe04131
]
SNARE
SNARE associated proteins
Others
Natpe_1167
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natpe_1167
Exosome [BR:
npe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natpe_1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
Mg_chelatase
AAA_7
AAA_17
AAA_18
ABC_tran
AAA_3
ATPase
AAA_lid_PRS2_C
Sigma54_activat
DUF815
NB-ARC
Parvo_NS1
AAA_24
AAA_30
TsaE
SLFN-g3_helicase
AAA_11
Vps4_C
PhoH
NACHT
IPT
Motif
Other DBs
NCBI-ProteinID:
AGB31077
UniProt:
L0JKG6
LinkDB
All DBs
Position
1132698..1134929
Genome browser
AA seq
743 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVGRDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVVLITEDTDVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GREEILQIHTRGMPLSDDVSLGHLADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIVKREDFRGALNEVEPSAMREVLVELPKISWDDVGGLHDAKDQVQESVEW
PLSNPERFDRLGVDPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDALAPGRGGETGSNVSERVVNQLLTELDGLEDMGDV
MVIGATNRPDMIDPALLRSGRFDRLVMIGQPDVDGRERILEIHTQDTPLAADVTLREIAE
ITDGYVGSDLESIAREAAIEALREDEEADVVEMRHFRQAMENVRPTITDDILDYYERIEE
EFRGGGGGGPDPTGRRGSRIGFQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagtccaactggaggttgcgaaggcgtacccgaacgattcgggtcgtggtatc
gcccgactcgacccggacacgctgttgcatctgaagctgagtccgggcgacatcatcgag
atcgagggtgcagacaccactgccgcgaaggtctggcgtgccgaccggcaggactggaac
accgacaccgtccgcatcgacggtttcacgcgccagaacgccgacgtcggtatcggcgag
cgggtgacgatccgcaaggccgaggcgacgaaagccgacaagctcgttctcgcgccgccg
gaggaggcgtcggtccagttcggctccgacgccgccggcatggtgaaacgccagatcctc
aagcggccggtcgtcggtcgcgacatcgttccggtgatgtcctcaacgaaccatccgttc
atgcggtcgcccggacaggcgatcccgctgatcgccgtcgaaaccgagcccgagggggtg
gtcctcatcaccgaggacaccgacgtcgaactccgcgaggagccgatttcgggcttcgag
aagaccggaggcgggatcacctacgaggacatcggtggcctccaaaacgagatccagcgg
gtcagggagatggtcgaactcccgatgaaacacccgcagatattcaagaaactcggcatc
gagccgccacaaggtgtcctcctgcacggcccgccgggcactgggaaaacgctgctcgcg
aaggccgtcgccaacgagacctccgccagtttcttctctatcgccgggccggagatcatc
tcgaagtactacggcgagtccgaacagcaactcagggagatcttcgaggacgcgaccgag
gagtcgccctcgatcatcttcatcgacgaactcgactccatcgcgcccaaacgcgaggac
gtcaccggcgaagtcgaacgccgcgtcgtcgcccagctgctgacgatgatggacggcctc
gagtcacgaggccaggtcatcgtcatcgcggcgactaaccgcgtcgacagcgtcgatccc
gccctccgacggccgggccggttcgaccgcgagatcgaaatcggcgtccccgacgagacg
ggccgcgaggagatcctgcagatccacacccgcgggatgcccctctcggacgacgtcagc
ctcggtcacctggccgacgagacccacggtttcgtcggggccgacatcgagagtctgacc
aaggaggccgcgatgaaggcgctgcgccggtacctccccgagatcgatctcgacgaggag
gacatcccgccgagcctgatcgaccggatgatcgtcaaacgggaggacttccgcggtgcc
ttgaacgaggtcgaaccctcggcgatgcgggaagtcctcgtggagctgccgaagatctcc
tgggacgacgtcggcggcctccacgacgccaaggatcaggtccaggaatcggtcgagtgg
ccgctctcgaaccccgagcggttcgatcggctcggcgtcgacccgcctgccggcgtcttg
ctgtacggcccgccgggcaccgggaagacgctgatggcgaaagccgtcgccaacgagacc
aatgccaacttcatctcggtgcgtggcccgcaactgctctcgaagtgggtcggcgaatcg
gagaaagccatccgccagaccttccgcaaggcccgccaggtctcgccgacggtcatcttc
ttcgacgaactcgacgcgctcgcgcccggacggggcggtgagaccggctcgaacgtctcc
gagcgggtcgtcaaccagctgctgaccgaactcgacggcctcgaggacatgggcgacgtg
atggtcatcggcgcgaccaaccgcccggacatgatcgaccccgcactgctgcgctcgggc
cgcttcgaccgactggtcatgatcggccagcccgacgtcgacggccgcgaacgcatcctc
gagatccacacccaggacacgccgctggcggccgacgtcaccctgcgagagatcgccgag
atcacggacggctacgtcggcagcgacctcgagtcgatcgcccgcgaggcggccatcgag
gcgctgcgcgaggacgaggaggccgacgtcgtcgagatgcgacacttccgccaggccatg
gagaacgtccggccgacgatcaccgacgacatcctcgactactacgagcggatcgaagag
gagttccgcggcggtggcggcggcggtcccgacccgacggggcgtcgcggcagccggatc
ggcttccagtaa
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