Natrinema pellirubrum: Natpe_1655
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Entry
Natpe_1655 CDS
T02425
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
npe
Natrinema pellirubrum
Pathway
npe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Natpe_1655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npe03019
]
Natpe_1655
03009 Ribosome biogenesis [BR:
npe03009
]
Natpe_1655
04131 Membrane trafficking [BR:
npe04131
]
Natpe_1655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npe04147
]
Natpe_1655
Messenger RNA biogenesis [BR:
npe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Natpe_1655
Ribosome biogenesis [BR:
npe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Natpe_1655
Membrane trafficking [BR:
npe04131
]
SNARE
SNARE associated proteins
Others
Natpe_1655
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Natpe_1655
Exosome [BR:
npe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Natpe_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_14
AAA_22
AAA_33
RNA_helicase
nSTAND3
NPHP3_N
AAA_28
AAA_7
DUF815
Mg_chelatase
AAA_25
ABC_tran
IstB_IS21
AAA_3
NB-ARC
TsaE
Sigma54_activat
AAA_24
ATPase
AAA_11
AAA_17
Parvo_NS1
Zeta_toxin
AAA_18
AAA_30
PhoH
SLFN-g3_helicase
AAA_lid_PRS2_C
bpMoxR
Bac_DnaA
Zot
DUF3860-like
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
AGB31552
UniProt:
L0JLT9
LinkDB
All DBs
Position
1627246..1629510
Genome browser
AA seq
754 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMNELDLENGDYIVISGKGEGQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDTVDIEPADVKPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTSIEISETPAEQVQSGGGA
SAEGVPNVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEKLREVFEEAEENAPAIVFIDELDSIAAKR
EDAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVPD
KDGRKEILQVHTRGMPLQEGIDLDRYAENTHGFVGADLESLTREGAMNALRRIRPDLDLE
EDEIDAEVLETLEVTEGDFKEALKGIQPSAMREVFVEVPDVTWNDVGGLEDTKERLRENV
QWPLDYPEVFDELDMQAAKGVLMYGPPGTGKTLLAKAVANEAQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGQRGRQQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEGGRRKIFEVHTRDKPLADAVDLDW
LAAETEGYVGADIEAVTREASMAASREFINSVDPEEMADTVGNVRISKEHFEHALEEVNP
SVTPETREQYEEIEEQFDTAEPAQEEEQLGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaccgtcaaaccactgaaacagaaggacgccggccgcggactcgccgcgatc
gaccgggtatcgatgaacgaactcgacctcgagaacggtgactacatcgtcatctcgggg
aagggggagggacaagccgtcgctcgcgtctggccgggctacccggaggacgagggccgg
ggtatcgtccggatcgacggccgtctccgtcaggaggccgacgtcgggatcgacgatacg
gtcgacatcgaacccgccgacgtcaaacccgcgaagtcggtcacggtcgcgctcccgcag
aacctgcgtatccggggcgacatcgggccgctcgtccgcgacaagctctccggacaggcc
gtcactgagggccagacggtgccgttctcgctctcgttcggcccgatggccagctccggc
cagtcggtcccgctgaagatcgccagtacctcgccgtcgggcacggtcgtcatcacggac
tcgaccagcatcgaaatctccgagacgccggccgaacaggttcagtccgggggcggcgcg
tccgccgagggcgtccccaacgtcacctacgaggacatcggcggtctggacgacgaactc
gaccaggtccgcgagatgatcgagctgccgatgcgccaccccgagctgttccaacagctc
ggcatcgagccgccgaagggcgtcctgctgcacggcccgccgggcaccgggaagaccctg
atggccaaggccgtcgccaacgagatcgatgcccacttcgagaccatctccgggccggag
atcatgtcgaagtactacggcgagagcgaggagaagctccgcgaggtcttcgaggaggcc
gaggagaacgcgcccgcgatcgtcttcatcgacgaactcgactccatcgcggcaaagcgc
gaggacgccggcggtgacgtcgaacgacgcgtcgtcgcccaactgctctcgctgatggac
ggcctcgaggaacggggccgggtcacggtcatcgccgcgaccaaccgcatcgacgacatc
gaccccgcgctccggcgtggcggtcgcttcgaccgcgagatcgagatcggcgtccccgac
aaggacggccgcaaggagatcctgcaggtccacacccgcgggatgcccctgcaggagggg
atcgacctcgatcggtacgccgagaacacccacggcttcgtcggggccgacttagagagc
ctgacccgcgagggcgcgatgaacgccctccgtcgcatccgtcccgatctcgatctcgag
gaagacgagatcgatgccgaggtcctcgagacgctcgaggtcaccgagggcgacttcaag
gaggcgctcaagggcatccaaccgtccgcgatgcgggaggtcttcgtcgaggtccccgac
gtcacgtggaacgacgttggtggcttagaagacaccaaagagcggctccgcgagaacgtc
caatggccgctcgactaccccgaggtgttcgacgaactggacatgcaggccgccaagggc
gtgctgatgtacggcccgccgggcaccgggaagaccctgctcgcgaaggccgtcgccaac
gaggcccagtcgaacttcatctcgatcaagggccccgagctgctgaacaagtacgtcggc
gagtccgagaagggcgtccgcgaggtcttcgagaaggcgcggtcgaacgcaccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggccagcgcggccgccagcagggcgactcc
ggcgtcggcgaacgcgtcgtctcccagctgctcactgaactcgacgggctcgaggaactc
gaggacgtcgtcgtgatcgccacgaccaaccggcccgacctgatcgattcggccctgctc
cgtccgggacgcctggaccgtcacgtccacgtgcccgtccccgacgagggcggccgccgg
aagatcttcgaggtccacacccgcgacaagcccctggccgacgcggtcgacctcgactgg
ctcgccgcggagacggaaggctacgtcggcgccgacatcgaagcggtcacccgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgatcccgaggagatggccgacacc
gtcggcaacgtccgcatcagcaaggaacacttcgaacacgccctcgaggaggtcaacccg
agcgtgacccccgaaacccgcgagcagtacgaggagatcgaagagcagttcgacaccgcc
gaaccggctcaggaagaagagcaactcggccgcaccttccagtaa
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