Natrinema pellirubrum: Natpe_1785
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Entry
Natpe_1785 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_1785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_1785
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_1785
Prokaryotic type
Archaeal type
TFB
Natpe_1785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_11
Xre-like-HTH
HTH_23
HTH_24
MerR
Sigma70_r4_2
Sigma70_r4
HTH_28
HTH_DeoR
HTH_IclR
HTH_6
ORC6_2nd
HTH_5
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AGB31673
UniProt:
L0JLE7
LinkDB
All DBs
Position
complement(1759888..1760712)
Genome browser
AA seq
274 aa
AA seq
DB search
MTTESQDAVLRHLTSIQQTLQLDENIQQYGKLLVSELTARELQIRVPTRTAAACFLIACR
LRKTPIRVTKIADASNVAESEILNEKKRISDALELGIPNDDPIVILKEACKDLALSADIQ
AHAQQIADLGAEAGVTSGVSPYTYAAAVLYVANSAADTDLSQADIADQFDVSTATLRDRR
DDLLDAIGSQLFKLQYPAAPSEAVSLVDDLLHHAQTAHWAQGKRHMGVLAGAWLFAAKEY
QTETSVSELAALTGVSESTIRARYEDFDRSHNGW
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggaatctcaagacgccgtcctcagacacctgacgtcgatccaacagaccctc
caactggatgaaaacatccagcagtacggtaaacttctcgtttcagaactcaccgcacgc
gaacttcagatccgagttcccactcgtactgctgcggcatgcttcctcattgcatgccgg
ttgcgaaagactccgattcgtgtgactaagatagccgacgcctcaaatgttgctgaatca
gagattcttaacgaaaagaaacggatctcggacgcgctggaactcggaataccgaacgac
gatccaatagtaatactcaaagaagcatgcaaagatctagctctctctgccgacatccaa
gctcacgcacaacagattgcagacttaggtgccgaagccggagtcaccagtggcgtctct
ccatatacatacgcggcagctgtactctacgttgccaactcagctgccgacaccgacctc
tctcaggccgacatcgccgaccaatttgatgtatcgacagccacactccgagacagacgc
gacgatctacttgacgcaatcggaagccaactgttcaaactacaatacccagcagccccg
tccgaagccgtctcactcgttgacgacctgctgcaccacgcacagactgcgcactgggca
cagggcaaacgccatatgggcgttctcgctggagcatggttgtttgccgcgaaggaatat
caaaccgagaccagcgtatcagaactcgcggccctcactggtgtgagtgaatcaacgatt
cgtgcccgctacgaggactttgaccgttctcataatggctggtga
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