Natrinema pellirubrum: Natpe_2168
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Entry
Natpe_2168 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_2168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_2168
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_2168
Prokaryotic type
Archaeal type
TFB
Natpe_2168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_AsnC-type
HTH_11
Zn_ribbon_IS1595
HTH_23
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AGB31994
UniProt:
L0JL46
LinkDB
All DBs
Position
complement(2111750..2112724)
Genome browser
AA seq
324 aa
AA seq
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MTGTSVDATDERTTRNGERNAAPERERSECPECTGRIAYDEEHGERACADCGLVLDADGI
DYGPEWRRFDDDGDDRCRVGAPVTARKHDKGLSTTIGWQDEDAYGNRISGRKRRQLQRLR
TWNERFTSKNARERNLKQALGEIERMASALGLPEPCRETAGVIYRRAVEEELLPGRSIEA
MATACLYAAARQQGTPRTLVAFASVSRVEKLPIQRAYRYLSSELGLKIEPADPIHYLPQY
ASELGVGDETERLARKILEAAKDRDLHSGRSPAGLAAAAIYGAGRLTDEGLTQERIGEET
GVSGVTVRNRYRELLDAYGATRDR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactggaacgagcgtcgacgcgaccgacgagcggacgacccggaacggcgagcgcaat
gccgctcccgagcgggagcgttcggagtgtccggagtgtaccggccggatcgcctacgac
gaggaacacggtgagcgagcctgtgcggactgtgggctcgttctcgatgccgacggaatc
gattacggaccggagtggcgacgcttcgacgacgacggcgacgaccggtgtcgagtcggc
gcgccggtcacggcgcgcaaacacgacaagggcctcagcacgacgatcggctggcaggac
gaggacgcgtacgggaaccggatctcggggcgaaagcgccgccaactccagcggctgcgg
acctggaacgaacgctttacgtcgaaaaacgcccgcgaacggaacctcaagcaggcactc
ggcgagatcgagcgcatggcgtcggcgctcggcctccccgagccgtgtcgcgagacggcc
ggcgtcatctaccgccgggccgtcgaggaagagctgttgccgggccggtcgatcgaggcg
atggcgaccgcctgtctgtacgcggccgcccgccagcagggcaccccgcggacgctcgtc
gcgttcgcgtcggtcagccgggtcgagaaactgcccatccagcgggcctatcgctatctc
tcgagcgagctggggctcaaaatcgagcccgccgacccgatccactacctcccgcagtac
gcctccgaactgggtgtcggcgacgagaccgaacgcctcgctcggaagatcctcgaggcg
gcaaaggaccgggacctccacagcgggcggagcccggccggactggctgcggcggcgatc
tacggggcgggtcggctgaccgacgagggcctcacacaggagcggatcggcgaggaaacc
ggtgtcagcggtgtcacggtccggaaccgctaccgcgaactactggacgcctacggggcg
acccgtgatcgatag
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integrated database retrieval system
