Natrinema pellirubrum: Natpe_2511
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Entry
Natpe_2511 CDS
T02425
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
npe
Natrinema pellirubrum
Pathway
npe00260
Glycine, serine and threonine metabolism
npe00460
Cyanoamino acid metabolism
npe00630
Glyoxylate and dicarboxylate metabolism
npe00670
One carbon pool by folate
npe00680
Methane metabolism
npe01100
Metabolic pathways
npe01110
Biosynthesis of secondary metabolites
npe01120
Microbial metabolism in diverse environments
npe01200
Carbon metabolism
npe01230
Biosynthesis of amino acids
npe01240
Biosynthesis of cofactors
npe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Natpe_2511
09102 Energy metabolism
00680 Methane metabolism
Natpe_2511
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Natpe_2511
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Natpe_2511
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Natpe_2511
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Natpe_2511
Enzymes [BR:
npe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Natpe_2511
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF7620
Motif
Other DBs
NCBI-ProteinID:
AGB32323
UniProt:
L0JND1
LinkDB
All DBs
Position
complement(2451304..2452551)
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AA seq
415 aa
AA seq
DB search
MDHDKVRDVDPAVADALEGEVDRQRETLQMIASENHASEAVIDAQGSALTNKYAEGYPGE
RYYGGCEYADEVEELAIERATELFGADHVNVQPHAGTQANQAVYFAMLEPGDKILSLDLN
HGGHLSHGHPANFTGQLYEVEQYEVDAETGYIDYDALADHAAEFDPDIIVSGYSAYPREI
DFERIQAAADDVGAYHLADIAHITGLVAAGVHPSPVGIADFVTGSTHKTIRAGRGGIVMC
DEEYADDIDAAVFPGGQGGPLMHNVAGKAVGFKEALQPEFTEYAEQTVANAKALGESLSE
NGFSLVSEGTDNHLVLVDLRESHPDTSGGDAEEALEEAGIVLNGNTVPGETRSPFNPSGI
RAGTPALTTRGFDEDDCRKVGDLIARVIDAPEDEAVIEDVRAEVAALCDANPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgacaaggtacgggacgtcgatcccgccgtcgccgacgcgctcgagggcgag
gtcgatcgccagcgcgagacgctccagatgatcgccagcgagaaccacgccagcgaggcc
gtcatcgacgcgcagggcagcgccctgaccaacaagtacgccgagggctaccccggcgag
cgctactacggcggctgtgagtacgccgacgaggtcgaggaactcgcaatcgagcgtgcg
acggaactgttcggtgctgaccacgtcaacgtacagccccacgcgggcacgcaggccaat
caggcggtgtacttcgcgatgctcgagcccggcgacaagatcctgtcgctggatctcaac
cacggcggtcacctcagccacggtcacccggcgaatttcacgggccagctctacgaggtc
gaacagtacgaggtcgacgcggagacgggctatatcgactacgacgccctcgcggaccac
gccgccgagttcgacccggacatcatcgtctcgggctactccgcgtacccgcgcgagatc
gacttcgaacgcatccaggcggccgccgacgacgtcggcgcctatcacctcgcggacatc
gcccacatcaccgggctcgtcgccgcgggcgtccacccctcgccggtcggcatcgccgac
ttcgtcaccggctcgacccacaagaccatccgcgccggtcgcggcggcatcgtcatgtgc
gacgaggagtacgccgacgacatcgacgcggccgtcttccccggcggtcagggcggcccg
ctgatgcacaacgtcgccggcaaagccgtcggcttcaaggaggcgctccagcccgaattc
accgagtacgccgagcagacggtcgcgaacgcgaaggcgctcggtgagagcctctccgag
aacggcttctcgctggtctcggaggggaccgacaaccacctcgtcctcgtcgacctgcgc
gagagccatcccgacacctccggcggcgacgccgaggaggccttagaggaggccggcatc
gtcctcaacgggaacaccgtccctggcgagacgcgctcgccgtttaaccccagtgggatc
cgcgccggcacgccggcgctgaccacgcgtggcttcgacgaggacgactgccggaaagtc
ggtgatctgatcgcccgcgtcatcgacgctcccgaagacgaagccgtcatcgaggacgtc
cgcgccgaggttgcggccctctgtgacgccaacccgctctacgagtag
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