Natrinema pellirubrum: Natpe_2629
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Entry
Natpe_2629 CDS
T02425
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
npe
Natrinema pellirubrum
Pathway
npe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Natpe_2629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npe03400
]
Natpe_2629
Enzymes [BR:
npe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Natpe_2629
DNA repair and recombination proteins [BR:
npe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Natpe_2629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGB32436
UniProt:
L0JPY2
LinkDB
All DBs
Position
2569671..2570300
Genome browser
AA seq
209 aa
AA seq
DB search
MGLRSPTPVSYLSMNDEAHDVLRADPVMAGLLDRHDPYVEPDWSEYERLCISIINQQLST
ASAAAVRERVFEVLDGEVTPESVLAADDEAIRDAGLFRRKIEYVRNAARAFRENDYSRTG
LASHSDGEVVDLLTEITGIGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELT
RAEMREIAEPWRPYRSVATRYIWAEYESD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccggtcccctacacccgtctcatacctgtccatgaacgacgaggcacacgac
gttctccgtgcggatcccgtgatggccgggctgctcgaccgacacgatccctacgtcgaa
cccgactggagcgagtacgagcggctctgtatctcgatcatcaaccagcagctctcgacc
gcgagcgccgcggccgtccgggagcgggtcttcgaggtcctcgatggggaagtgacgccg
gaatcggtactggctgccgacgacgaggcgattcgcgacgccggcctcttccggcgcaag
atcgagtacgtgcgaaacgccgcccgcgccttccgggagaacgattacagccggaccggc
ctcgcctcccactccgacggggaggtcgtcgacctgctgaccgagatcacggggatcggc
gagtggaccgcccggatgtatctgctgttcgtcctcgagcggcccgatgtcctcccgctc
ggtgacctcgctgtccgccgcgggatcgaacagttgtacgccgacggcgaggagttgacc
cgcgcggagatgcgcgagatcgccgagccgtggcggccctaccgcagcgtcgcgacgcgc
tatatctgggccgagtacgagtccgactga
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