Natrinema pellirubrum: Natpe_2668
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Entry
Natpe_2668 CDS
T02425
Name
(GenBank) transcription initiation factor IIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_2668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_2668
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Natpe_2668
Prokaryotic type
Archaeal type
TFE
Natpe_2668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
Rad50_zn_hook
DNA_ligase_ZBD
DUF7129
Zn_ribbon_LysW
Zn_ribbon_6
Zn_ribbon_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AGB32474
UniProt:
L0JMI6
LinkDB
All DBs
Position
complement(2611445..2611969)
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AA seq
174 aa
AA seq
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MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELDLELNDVRRALFILY
ENDLATYRRLRDEDSGWLTYLWTFEYDNIPENLEEEMYRLREALDERREYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLESMDNDRLVNAMDDRLDALEDELNIDADA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggacccggtgatccagaaatatttgcacgagctggtc
ggtcccaaggggatgcccgtcgcggcggcaccgccggacggggaagtgaccgacgaggaa
ctcgccgaggaactcgacctcgagttgaacgacgtgcggcgcgcgctgttcattctctac
gagaacgatctcgccacgtatcggcgactgcgcgacgaggactcggggtggctgacctac
ctctggaccttcgagtacgacaacatcccggaaaatctcgaggaggagatgtaccggctg
cgcgaggccttggacgagcgccgggagtacgagcgcaaccacgagttctacctctgtgag
atctgttccatccgcttcgagttcggcgaggcgatggacttcggcttcgagtgccccgaa
tgcggctcgccgctggaatcgatggacaacgaccgactggtcaacgcgatggacgaccgc
ctcgacgcactcgaggacgaactcaacatcgacgcggacgcctaa
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