Natrinema pellirubrum: Natpe_3311
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Entry
Natpe_3311 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_3311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_3311
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_3311
Prokaryotic type
Archaeal type
TFB
Natpe_3311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
DZR_2
Zn_ribbon_LysW
HTH_Tnp_ISL3
DUF7560
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AGB33098
UniProt:
L0JQJ3
LinkDB
All DBs
Position
complement(3236389..3237369)
Genome browser
AA seq
326 aa
AA seq
DB search
MTNAPSNTRVRRSEPETNETETETEEEDLVCPECAGNLVVDDEHGETVCEDCGLVVEEDS
VDRGPEWRAFDAAEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQR
LRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALDEDLLPGRSI
EGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYVP
RFASGLELSDEAEHRARSLLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSD
VADISEVTIRNRYHELLEAEETIGLA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgcaccatcgaacacgagagtacgacgtagcgaacccgaaacgaacgaaacg
gaaaccgaaacggaagaggaggatctcgtctgtccggagtgtgcgggcaatctcgtcgtc
gacgacgaacacggcgaaacggtctgtgaggactgtggactggtcgtcgaggaggactcc
gtcgaccgcggtcccgagtggcgcgcgttcgacgccgccgagaagaacgagaagtcccgc
gtgggtgcgcccacgacgaacacgatgcacgacaaggggctctcgacgaacatcgactgg
cgcaacaaggacgcctacggcaactcgcttggctcgcgccagcgcgagaagatgcagcgc
ctgcgcaagtggaacgagcgcttccgaactcgagactccaaggagcgcaacctgaaacag
gccctcggcgagatcgaccgcatggcctctgcactcggcctcccgacgaacgtccgcgag
acggcgtcggtcatctaccggcgcgcactcgacgaggacctgctccccggtcgctcgatc
gagggcgtctcgacggcttgtgtctacgccgccgcccggcaggccggcgtcccccgaagt
ctcgacgagatcgccgacgtctcccgcgtcgagaaaaacgagatcgcacgcacctaccgc
tacgtggttcgggaactcggtctcgaggtccagccggccgaccccgagagctacgtgccc
cgctttgcttccggcctggaactctccgacgaggccgaacaccgcgcgcggagcctgctc
cagaacgccaaggagaagggcgtccacagcggcaagtcgccggtcggcctcgccgcggca
gcggtctatgccgccgcactcctgaccaacgagaagaccacgcaggccgccgtctccgat
gtcgccgacatctccgaagtcacgattcggaaccgctaccacgaactcctcgaggccgag
gagacgatcggcctggcctaa
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