Natrinema pellirubrum: Natpe_3439
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Entry
Natpe_3439 CDS
T02425
Name
(GenBank) single-stranded DNA-binding protein
KO
K07466
replication factor A1
Organism
npe
Natrinema pellirubrum
Pathway
npe03030
DNA replication
npe03420
Nucleotide excision repair
npe03430
Mismatch repair
npe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Natpe_3439
03420 Nucleotide excision repair
Natpe_3439
03430 Mismatch repair
Natpe_3439
03440 Homologous recombination
Natpe_3439
03460 Fanconi anemia pathway
Natpe_3439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npe03000
]
Natpe_3439
03032 DNA replication proteins [BR:
npe03032
]
Natpe_3439
03400 DNA repair and recombination proteins [BR:
npe03400
]
Natpe_3439
Transcription factors [BR:
npe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Natpe_3439
DNA replication proteins [BR:
npe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Natpe_3439
DNA repair and recombination proteins [BR:
npe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Natpe_3439
MMR (mismatch excision repair)
Natpe_3439
DSBR (double strand breaks repair)
HR (homologous recombination)
Natpe_3439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
OB_MEIOB_N
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
AGB33215
UniProt:
L0JNV9
LinkDB
All DBs
Position
complement(3350597..3352096)
Genome browser
AA seq
499 aa
AA seq
DB search
MHEHRMSDIEGVYEDLEADVSLEEFREAVEQKVEQMGGLADEETAAMLIAHEIGESEVGG
IADIEPGMEEAKFVAKVISIGEKRTFERDGEDEDGQVVNVEVADETGSVRAAFWDDHAEA
AIGELEEGQVLRIKGRPKEGFSGVEVSVDDVEPDDDTEVEVQVSDTYAIEDLSLGLSNVN
LVGLLLDTDSVRTFDRDDGSEGKVSNLVLGDSTGRIRVTLWDERADLATELEAGTTVEVV
DGYVKERDGQLELHVGNRGAVEEVDEEVEYVPESTPIEDVEIGQTVDLAGVVRSADPKRT
FDRDDGSEGQVRNIRVQDATDDIRVALWGEKADIDIGPGDEVALGDVEIQDGWQDDLEAS
AGWQSTVTVLESDSGAAGEEADGSSDENAGLSAFAGDGSAAEETAADGTGTADSTGDGDP
ADSAAKTAATDGAAVTSDEPTDGEELEFTGVVVQAGSPVVLDDGETTMSVATDVDVGLGE
EVTARGVVRDGRLEANDVF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagcatagaatgagcgatatcgagggcgtatacgaggacctcgaggccgacgtc
tccctcgaggagtttcgcgaggccgtcgagcagaaagtcgagcagatgggtgggctcgcg
gacgaggagacggcggcgatgctcatcgctcacgagatcggcgagagcgaagtcggcggg
atcgccgacatcgagcccggcatggaggaggcgaagttcgtcgccaaggtgatctcgatc
ggcgagaaacgaacgttcgaacgtgacggcgaggacgaggacggccaggtcgtcaacgtc
gaggtcgccgacgagaccggctcggtgcgggccgcgttctgggacgaccacgccgaggcc
gcgatcggggaactcgaggaggggcaggtcctccggatcaagggccgtcccaaggagggc
tttagcggcgtcgaggtcagcgtcgacgacgtcgaacccgacgacgacaccgaggtcgag
gtgcaggtttccgacacctacgccatcgaggacctctcgcttggcctctcgaacgtcaat
ttggtcggtctgctgctcgataccgacagcgtccgcaccttcgaccgcgacgacggctcc
gaggggaaggtctcgaacctcgtgctgggcgattcgaccggccggatccgcgtcacgctg
tgggacgaacgggccgacctcgcgaccgaactcgaggccgggacgaccgtcgaggtcgtc
gacggctacgtcaaggaacgcgacggccaactcgagttacacgtcggcaaccgcggtgcg
gtcgaggaagtcgacgaggaagtcgagtacgtcccggagagtacgcccatcgaagacgtc
gaaatcggtcaaacggttgatctcgctggcgtcgtccgttcggccgacccaaagcggacc
ttcgaccgcgacgacggctcggagggacaggtccgcaacatccgggttcaggacgcgacc
gacgacatccgcgtggcgctgtggggcgagaaagccgacatcgatatcggccccggcgac
gaggtcgccctcggcgatgtcgagattcaggacggctggcaggacgacctcgaggcctcc
gcgggctggcagtcgacggtgacggtcctcgagtccgactcgggggcggccggcgaggag
gccgacggctcgagcgacgagaacgcggggctctccgcgttcgccggcgacggaagcgcg
gccgaggagaccgcggccgacggaaccggcacggcggactcaaccggtgacggcgacccc
gccgattcagcggctaaaaccgccgccaccgacggcgctgccgtcacctccgacgagccg
accgacggcgaggaactcgagttcacgggcgtcgtcgtgcaggccgggagcccggtcgtc
ctcgatgatggagagacgaccatgagcgtcgcgaccgacgtcgacgtcgggctcggcgag
gaggtaaccgcccgaggggtcgtccgcgacggccgcctcgaggcaaacgacgtgttctga
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integrated database retrieval system
