Natrinema pellirubrum: Natpe_3477
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Entry
Natpe_3477 CDS
T02425
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
npe
Natrinema pellirubrum
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npe03016
]
Natpe_3477
Enzymes [BR:
npe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Natpe_3477
Transfer RNA biogenesis [BR:
npe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Natpe_3477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
SPL
TRAM
Motif
Other DBs
NCBI-ProteinID:
AGB33252
UniProt:
L0JRK3
LinkDB
All DBs
Position
complement(3382588..3383841)
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AA seq
417 aa
AA seq
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MARYHIETYGCTSNRGESREIERRLRDAGHYRVDGPEQADVAILNTCTVVEKTERNMLRR
AEELADETADLFITGCMALAQGEEFARADVDGQVLHWDEVPEAVTNGECPTTTPDAEPIL
DGVVGILPIARGCMSDCSYCITKQATGKIDSPSIEENVEKARALIHAGAKEIRITGQDTG
VYGWDEGERKLHRLLERICAIEGDFRVRVGMANPKGVHGIREDLADVFAENDELYDFLHA
PVQSGSDDVLGDMRRQHQVEEYLEVVEAFDERLDYWTLSTDFIVGFPTETDHDHAQSMAL
LRETRPEKINVTRFSKRPGTDAAELKGLGGTIKKERSKEMSEVKREIVGEAYADMVGEVR
EDCLVVEDGTADSVKCRDSAYRQIIVQNADDYGIAPGDFVDLEITAHETMYAFGEPV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtatcacatcgaaacctacggctgcacgtccaaccgcggggagagccgcgag
atcgagcggcgactccgagacgcgggccactaccgggtcgacggccccgaacaggccgac
gtcgccatcctcaacacctgtaccgtcgtcgagaagaccgaacgcaacatgctccggcgg
gccgaggaactggcagacgagacggcggatctcttcatcacggggtgtatggccctggcc
cagggtgaggaattcgcacgggccgacgtggacgggcaggtactgcactgggacgaggtc
ccggaagcggtcaccaacggcgagtgcccgacgacgacccccgacgccgagccgatctta
gacggcgtcgtcggcatcctcccgatcgcacggggctgtatgtccgactgttcgtactgt
atcaccaagcaggccaccggcaagatcgactccccgtcgatcgaggaaaacgtcgagaag
gcccgggcactgatccacgccggcgcgaaggagattcgtatcaccggtcaggacaccggc
gtctacggctgggacgagggcgagcgcaaactccaccgcctgctcgagcggatctgtgcg
atcgagggcgacttccgcgtgcgagtggggatggccaacccgaagggcgtccacggcatc
cgcgaggacctcgccgatgtcttcgccgaaaacgacgaactctacgacttcctgcacgca
cccgtccagtcgggcagcgacgacgttctcggggacatgcgccgccagcaccaggtcgag
gagtatctcgaggtcgtcgaggccttcgacgagcgactggactactggacgctgtcgacg
gacttcatcgtcggcttcccgaccgagaccgatcacgaccacgcgcagtcgatggccctg
cttcgcgagacccggccggaaaagatcaacgtcacgcgcttttcgaagcggcccggcacc
gatgccgccgagctgaaggggcttggcgggacgatcaagaaggaacgctcgaaggagatg
agcgaagtcaagcgcgagatcgtcggcgaggcctacgccgacatggtcggcgaggtccgc
gaggactgtctcgtcgtcgaggacggcaccgccgattcggtgaagtgtcgtgactcggcc
taccggcagataatcgtccaaaacgccgacgactacggcatagcgcccggcgacttcgtc
gacctcgagatcacggcccacgagacgatgtacgccttcggcgagcccgtgtag
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