Natrinema pellirubrum: Natpe_3501
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Entry
Natpe_3501 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_3501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_3501
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_3501
Prokaryotic type
Archaeal type
TFB
Natpe_3501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
Zn_ribbon_RRN7
Auto_anti-p27
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AGB33273
UniProt:
L0JR32
LinkDB
All DBs
Position
complement(3401731..3402696)
Genome browser
AA seq
321 aa
AA seq
DB search
MASPTRQRERDPETTEKTQESERERVCDECDGGTLVKSEDQGELVCDQCGLIVEGSNIDH
GPEWRAFNHSERQNKSRVGAPTTQTMHDKGLTTAIDWKNQDAYGRSISSDKRSQMRRLRK
WQERIRTKDAGERNLQFALSETDRMASSLAIPRSVREVACVIYRRALDEDLIRGRSIEGV
ATSTLYAACRMEGIPRSLEEVAAVSRVERKEIGRTYRYIAQELGLEMEPVNPKKYVPRFC
SELELSEEVQVKANEIIDVTTEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVSDVAQ
VTEVTIRNRYQEQIEAMGIHE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccccacccgccagcgcgaacgcgatcctgaaacgacagaaaaaacgcaggaa
tcggagcgcgagcgggtgtgtgacgagtgcgacggcgggacactcgtcaaaagcgaggac
cagggcgaactcgtctgtgaccagtgcggcctgatcgtcgaagggagcaacatcgaccac
gggccggagtggcgcgcgttcaaccactccgagcgccagaacaagtcccgggtgggcgcg
ccgacgacccagacgatgcacgacaagggcctgacgaccgccatcgactggaagaaccaa
gacgcctacggccgctcgatctcctcggacaaacgcagccagatgcgccgcctgcgcaag
tggcaggaacgcattcggaccaaagacgccggcgaacggaacctccagttcgctctctcc
gagaccgaccggatggcctcctcgctggccatcccccgctcggtccgggaagtcgcctgc
gtcatctaccgtcgagccctcgacgaggacctcatccgcggccgctcgatcgagggcgtc
gcgaccagtaccctctatgccgcctgccggatggagggcatcccccgctcgctcgaggaa
gtcgccgccgtctcccgcgtcgagcgcaaggagatcggccgcacgtatcggtacatcgcc
caggaactcggcctcgagatggagccggtcaaccccaagaagtacgtcccgcgcttttgt
tcggaactcgaactgtccgaggaggttcaggtcaaggccaacgagatcatcgacgtcacg
accgagaaggggctgctctcgggcaaatcgccgacgggctacgccgcggccgcgatctac
gctgcttccctgctctgtaacgagaagaagacccagcgcgaggtctccgacgtcgcacag
gtgaccgaggtcacgatccggaatcggtatcaggagcagatcgaagcgatggggatccac
gagtaa
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