Natrinema pellirubrum: Natpe_3628
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Entry
Natpe_3628 CDS
T02425
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
npe
Natrinema pellirubrum
Pathway
npe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Natpe_3628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_3628
Enzymes [BR:
npe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Natpe_3628
Transcription machinery [BR:
npe03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Natpe_3628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AGB33395
UniProt:
L0JPE7
LinkDB
All DBs
Position
complement(3545870..3547699)
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AA seq
609 aa
AA seq
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MSSQEREAKVYVNGSLVGTHPDPHELAEQIREARRIGDVSEMVNVSVKERTREVIVNADA
GRARRPLLVVEDGEPRISEQEIEALQEGDLEFEDLVDHGYIEFIDAEEEEDILVGVDEDD
LTENHTHLEIDPSLIFSIGAGMIPYPEHNASPRITMGAGMIKQSLGLPSANYRIRPDTRQ
HLLHYPQLSMVKTQTTEQIGYDERPAAQNFVVAVMSYEGFNIEDALVMNKASVERALARS
HFFRTYEGEERRYPGGQEDRFEIPSQDVRGARGEEAYNHLDEDGLVNPETTVDENSVLLG
KTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGIVDTVTLMEGEDGSKLSKVSVRDER
IPELGDKFASRHGQKGVVGHLAPQEDMPFTEEGVVPDLVLNPHALPSRMTVGHILEMIGG
KLGSMEGRRVDGTPFLGEDKDELREGLEEAGFDSAGKETMYSGITGEKIEAEIFVGVIFY
QKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERLL
DESDREFIHVCANCGMSAVENVEQRRVYCPNCDEETDIHEIEMSYAFKLLLDEMKALGIA
PRLELEDAV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaagaacgagaggcgaaagtctacgtcaacggatcgctggtgggcacccac
cccgatccgcacgaactggcagaacagatccgggaagcgcgacgcatcggcgacgtcagc
gagatggtcaacgtctcggtcaaagagcgcacccgcgaagtgatcgtcaacgccgacgcc
ggccgtgcgcgacgaccgcttctggtcgtcgaggacggcgaaccgcgtatctccgagcag
gagatcgaggcgctccaggaaggtgacctcgagttcgaggatctggtcgatcacggctac
atcgaattcatcgacgccgaggaggaagaggacatcctcgtcggcgtcgacgaggacgat
ctgaccgagaaccacacccacctcgagatcgacccgtcgctgatcttctcgatcggtgcg
gggatgatcccctaccccgaacacaacgccagcccccgcattacgatgggggcggggatg
atcaagcagtcgctcggtctgccgagcgcgaactaccggatccgaccggacacgcgccag
cacctgctgcattacccgcagctctcgatggtcaagacccagacgaccgaacagatcggt
tacgacgagcggcccgccgcccagaacttcgtcgtcgccgtgatgagctacgaggggttc
aacatcgaggacgcgctggtcatgaacaaggccagcgtcgagcgtgcgctcgctcgctcg
catttcttccggacctacgagggcgaggaacgccggtatccgggcggccaggaggaccgc
ttcgagatcccctcccaggacgtccgcggggcccgcggcgaggaagcctacaaccacttg
gacgaggacggcctcgtcaaccccgagacgacggtcgacgagaactccgtcctgctcggg
aagacgtccccgccgcgattcctcgaggagcccgacgacatgggcggactctcgccccag
aaacggcgcgagacctccgtcacgatgcgctcgggcgagtccgggatcgtcgacaccgtc
acgctcatggagggcgaggacggctcgaagctctcgaaggtctcggtgcgcgacgaacgg
atccccgaactcggggacaagttcgccagccgccacggccagaagggggtcgtcggccac
ctcgcaccccaggaggacatgcccttcaccgaagagggcgtcgtccccgacctcgtgctg
aacccccacgcgctgccgtcccggatgaccgtcggccacatcctcgagatgatcggcggc
aaactcggctcgatggaaggtcgccgcgtcgacgggacgcccttcctcggcgaggacaag
gacgaactccgcgaggggctcgaggaggccggcttcgattcggccggcaaggagaccatg
tattcgggcatcaccggagagaagatcgaggccgagatcttcgtcggcgtgatcttctac
cagaagctctaccacatggtctcgaacaagctgcacgcccgctcgcgcgggccggtacag
gtgctgacccgccaacccaccgaggggcgggcccgcgagggtgggctccgtatcggggag
atggaacgcgacgtgttcatcggccacggggcggccatgacgctgaaagaacgactcctc
gacgaatccgaccgtgagttcatccacgtctgtgccaactgtgggatgagcgcggtcgag
aacgtcgaacaacggcgtgtctactgtccgaactgcgacgaggagaccgatatccacgag
atcgagatgagctacgcgttcaagctcctcttggacgagatgaaggcgctgggtatcgca
ccacgactcgaactggaggacgccgtctaa
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