Natrinema pellirubrum: Natpe_3888
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Entry
Natpe_3888 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_3888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_3888
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_3888
Prokaryotic type
Archaeal type
TFB
Natpe_3888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AGB33645
UniProt:
L0JQ35
LinkDB
All DBs
Position
pNATPE01:complement(6437..7513)
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AA seq
358 aa
AA seq
DB search
MSNNASEKTVSDVQSTTTEERGHEPTVEHEPSRRSACPECEGQVITEDEQSFCTDCGLIV
ADEWVDLSPTLNDLGLVGDADQSIETVDPLRTDKGLHTKIGRSTDGHGNPLSNEQWEKVQ
RLRKWHKRMQFGEKRKRTKRLNEGLRDVEMIGGNLNLPDHVVKMAAQFLRSASEARLPGG
RMAWEALAGGAVLLAARASSVDRDEIDVAVATHTKAPHERVCAAARKIRCECGFDAPLIR
PNAVMKVVDALDDDAIPGARAVRTWRLAQHLMQLGDQVPVGPGTPRCTVAASALYAADRL
LSRKHLTQEQVAAAASTIVPTSRNRIARYSRELVDAYEAEHGTDDPGVGLEEERDTLR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacaacgcgagcgaaaagacggtttcggacgtacagagtacgaccaccgaagaa
cgcggtcacgagccgacggtcgaacacgaaccgtcgaggcggtcggcctgtcccgagtgt
gagggccaggtgatcaccgaagacgagcagtcgttctgcacggactgcgggctgatcgtc
gccgacgagtgggtggacctgagcccgacgctgaacgacctgggcctggtcggggatgcc
gaccagagcatcgagacagtggacccactccggacggacaagggcctccacacgaaaatc
ggaaggagcactgatgggcacggcaatcccctgagcaacgagcagtgggagaaggtccag
cgcctccggaagtggcacaagcggatgcagttcggcgagaagcgcaagcggacgaagcgg
ctcaacgaggggctgcgggacgtcgagatgatcggcggcaacctgaacttgccggaccac
gtcgtcaagatggcggcacagttcctccggagcgcctcggaagcgcggctaccgggtggg
cggatggcctgggaggcactcgccggcggcgccgtcctcctggccgcgcgagcctcatcg
gtcgaccgggacgagatcgacgtcgcggtcgcgacgcacaccaaagcgccccacgagcgg
gtgtgcgctgcggcgcggaagatccggtgtgaatgcgggttcgacgcgccactcatcaga
cccaacgccgtgatgaaggtcgtcgacgcgctcgatgacgacgccatccccggggcgcga
gccgtgcggacgtggcggctggctcaacacctgatgcaactcggtgaccaggtgccggtc
gggccaggaacgccacggtgcaccgtcgcggcgtcggcgctgtacgcggcggatcggctg
ctctcgcgcaagcacctcacccaagagcaggtcgccgcggcggcgagcacgatcgtgccg
acgtcccgaaaccggatcgcgcggtacagtcgggagctcgtcgacgcctacgaagccgaa
cacggcaccgacgacccgggtgtcgggctcgaagaagaacgggacaccctccgctga
DBGET
integrated database retrieval system
