Natrinema pellirubrum: Natpe_3903
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Entry
Natpe_3903 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_3903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_3903
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_3903
Prokaryotic type
Archaeal type
TFB
Natpe_3903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR
DUF7129
DUF1670
FYVE
DUF8122
DZR_2
RB_B
DUF8054
Cyclin_C
DUF1272
Motif
Other DBs
NCBI-ProteinID:
AGB33657
UniProt:
L0JSM3
LinkDB
All DBs
Position
pNATPE01:complement(17965..18891)
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AA seq
308 aa
AA seq
DB search
MAIRDIYETAFDENVQTDSSANQCPECGGRVTTNAVETVCEDCGLVVDEQRIDHGPEWRA
YDDDERERTGAPLTAARHDRGLSTEIGHGTDANGNTLSERKRRQVARMRREQSRGRFQSK
AERNLAHGLGEVRRIVSALELSEAIRDQACQLFRSAQNDNLLPGRSIEAMATASVYGACR
CNGLSRTLDDVTDPARVEQSRVTNAYKTLNTELGLPAQPVTPSAFVPRLASELDVSDRIR
QRARRLAEGSESTGVTTGVCPSGFAAACLYKAGHEQGQLLTQTDVAEVANVSPVTVRTHR
EALDELAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcagagacatctacgagacggcatttgacgagaacgtacagactgactccagc
gcgaaccagtgtcccgagtgcggcggccgggtcaccaccaatgcggtcgaaaccgtctgc
gaggactgtggcctcgtcgtcgacgagcagcgcatcgaccacgggccagaatggcgagcg
tacgatgacgatgagcgtgaacggacgggtgcgccgctgacggcggcgcgacacgaccgg
ggcctgtcgaccgagatcggacatggaacggacgcaaacggaaatacgctctctgaacgg
aagcggcggcaggtggcccggatgcggcgtgaacagtctcgtggcaggtttcagtcgaaa
gccgagcgcaacctcgcacacggtctgggggaggtccgccggatcgtgagcgcgctcgag
ctgtccgaggcgattcgtgaccaggcgtgccagctcttccggagcgcccagaacgacaat
ctcctgccgggtcggtcgatcgaagcgatggccacagcgagcgtctacggcgcctgtcgg
tgtaatggcctctcgcgaaccctcgacgacgtcaccgacccggcacgcgttgagcagtcg
cgcgtgacgaacgcgtacaagacgctgaacacggaactcggcctcccggcccagcccgtg
acgcccagtgcgttcgttccgcggctcgcgtcggaactcgatgtctccgatcgaattcgg
caacgagcacggaggttagcggagggctcggaatcaacgggagttacgacgggcgtctgc
ccgtcagggttcgccgcagcttgcctgtacaaagcggggcacgaacagggccagttgctt
acacagacggacgtcgcagaggtcgcgaacgtctctccggtcaccgtccgaactcaccga
gaagcgctggacgaactggctgtctaa
DBGET
integrated database retrieval system
