Natrinema pellirubrum: Natpe_4005
Help
Entry
Natpe_4005 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_4005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_4005
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_4005
Prokaryotic type
Archaeal type
TFB
Natpe_4005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF7573
A2L_zn_ribbon
Sigma70_r4
Cas12f1-like_TNB
FtrD-like
Cyclin_N
Trm112p
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AGB33739
UniProt:
L0JR59
LinkDB
All DBs
Position
pNATPE01:complement(105148..106110)
Genome browser
AA seq
320 aa
AA seq
DB search
MERSTRQQERQSETDHHVEESVSEQTCDECGSSSLVTSEDQGELVCEDCGLIIETTNIDR
GPEWRAFNHAERKSKSRVGAPTTQTMHDKGLTTQIDWKDQDAHGRSLSADKRSRMNRLRK
WQERIRAKDAGERNLQFALSEIDRMASALGIPRSVREVASVIYRRALDEDLIRGRSIEGV
ATACLYAACRREGIPRSLEEIADVSRVERKEIGRTYRYIAQELSLAMEPVDPKEYVPRFC
SELDSSETVQAKATEIIDTTAEQGLLSGKSPTGFAAAAIYAASLLCNEKRTQKEVAAVAQ
VTEVTIRNRYQEQIEAMGLH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtcaactcgccagcaggaacggcaatcagaaaccgatcaccacgttgaagaa
tcggtaagcgagcagacgtgcgacgaatgtggttcgagttcgctcgttacaagcgaggat
caaggggagctcgtctgtgaggactgtggactgatcatcgaaacaacgaacatcgaccgc
ggaccggaatggcgcgcattcaatcacgctgaacggaagagcaagtcccgggttggggca
cctacaacccagacgatgcatgataagggtctcaccacccagatcgactggaaggaccaa
gatgcccacggccgctccctgtcggcggacaagcgcagccggatgaaccgcctccgcaag
tggcaagaacgcattcgggcgaaggatgccggggagcgcaatctccagttcgcactcagc
gagatcgatcgaatggcaagcgcactcggcataccccgctcagttcgcgaagtcgccagt
gtcatctatcgacgagcgctggacgaggatctcatccgagggcggtcgatcgaaggggtt
gccacggcctgtctctatgctgcatgtcgtcgtgaaggcattccccggagtttagaggag
attgccgacgtttcacgggtcgaacggaaagagatcgggcggacgtaccgatatattgcc
caagagctatcgctcgcgatggaaccggtcgatccaaaggagtacgttccccggttttgt
tccgaactcgactcgagcgagacggtccaggccaaagccaccgagatcattgataccaca
gccgagcaggggctgctatccgggaagtccccgactgggtttgccgccgcggcgatctat
gccgcctcgctcctctgtaatgagaagcggacccaaaaggaggttgccgccgtcgcacaa
gtcaccgaagtcaccatccggaaccgatatcaagaacagatcgaggcgatgggactccac
tag
DBGET
integrated database retrieval system
