Natrinema pellirubrum: Natpe_4239
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Entry
Natpe_4239 CDS
T02425
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
npe
Natrinema pellirubrum
Pathway
npe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
npe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Natpe_4239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npe03021
]
Natpe_4239
Transcription machinery [BR:
npe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Natpe_4239
Prokaryotic type
Archaeal type
TFB
Natpe_4239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
Cyclin_C
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AGB33943
UniProt:
L0JT09
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All DBs
Position
pNATPE02:complement(26674..27651)
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AA seq
325 aa
AA seq
DB search
MGEGLAVLASSRITVRTMATRDIYESGFDEDVRTESSANQCPECEGRVTTNAVETICEDC
GLVIDEQRIDHGPEWRAFDEDERERTGAPLTAARHDRGLSTEIGRGTDANGNELSGQKRR
RLTRMRREQTRGRFQSKAERNLAHGLSEVRRISSALELSETIRDQACQLFRSAQNEDLLQ
GRSIEAMAAASVYGACRCNGRPRTLDDITESARVEQSRVTNAYTTLNTELGLPAQPVTPS
AFVPRLASELDVSDQIRQRARQLAEASESTGATTGVRPSGFAAACLYKAGREDGRWLTQS
DVADVANVSVVTVRTHRDALDELAV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggggctcgctgtactggcgagttcccgaatcacggtgagaacgatggcaact
agagacatctacgagagcggattcgacgaagacgtccgaacggaatcgagtgcgaaccag
tgtcccgagtgcgagggtcgagtcaccaccaacgcagtagaaaccatctgtgaggactgt
ggcctggtcatcgacgagcagcggatcgaccacgggccagagtggcgagcgttcgacgaa
gacgaacgggagcgcacgggcgctccgttgacggcggcacgacacgatcgagggttgtcg
acggagatcggccgcggaaccgatgcgaacgggaacgaactctcaggacagaagcgacgg
cggctcactcggatgcggcgtgaacagacccgtgggcggtttcagtcgaaagctgaacgc
aacctcgcacacgggcttagtgaagtccgccggatcagtagtgcgctcgaactatccgag
acgatccgtgaccaggcctgccagctattccgcagcgctcagaacgaggacctcctgcag
ggccggtcgatcgaggcgatggccgccgcgagtgtctacggggcgtgtcggtgtaacggg
cggccgcgaacgctcgacgacatcaccgagtcggcgcgcgtcgagcaatcgcgggtgacg
aacgcatacacgacgctgaatacggaacttggcctgccagcccaacccgtgacgccgagt
gcgttcgttccgcggttggcctcggagctcgacgtctccgatcaaatccggcagcgggct
cggcagctggcggaagcatccgaatcgaccggagcaaccacgggagttcgaccgtccggg
ttcgccgcagcctgtctgtacaaggccggacgcgaagacggacggtggctcacccagtcg
gacgtcgctgacgttgcgaacgtctcggtggtcaccgtacggacccaccgcgacgcgctg
gacgaactggctgtctaa
DBGET
integrated database retrieval system
