Neisseria perflava: LPB400_00475
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Entry
LPB400_00475 CDS
T07577
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
npf
Neisseria perflava
Pathway
npf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB400_00475 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_00475 (xth)
Enzymes [BR:
npf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LPB400_00475 (xth)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPB400_00475 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QXW90558
UniProt:
A0ABD7EY35
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All DBs
Position
complement(94625..95404)
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AA seq
259 aa
AA seq
DB search
MLKIISANVNGIRSAYKKGFYEYIVASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC
AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGKLSVISLYLPSGSSAEERQ
QVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIG
KVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYK
DEKFSDHAPLVVEYDYVAE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatcatctctgccaacgtcaacggcatccgctccgcctataaaaaaggtttt
tatgaatacatcgtcgcatcaggcgcggacattgtctgcgtgcaggaactgaaagctcaa
gaggccgacctatcagacgatatgaaaaatccgcacggtatgcacggctactggcattgc
gctgaaaagcgcggttacagcggcgtggcggtgtacagcaaacgcaaacccgacaatgtg
caaatcggcatgggcattgaagaatttgacagggaaggccgttttgtccgttgcgatttc
ggcaagttatcggtaatttcgctgtatctgcccagcggcagcagcgcggaagagcgccaa
caagtgaaataccgctttttggacgcgttctatcccatgctcgaagccatgaaaaacgaa
gggcgcgacatcgtcgtctgcggcgactggaacattgcccaccaaaacatcgacttgaaa
aactggaagggcaatcagaaaaattcgggcttcttgcctgaagagcgcgaatggataggc
aaagtcatccacaagctcggttggacggatatgtggcgcacactttatccggatgtgccg
ggctatacatggtggagcaaccgcggacaagcgtatgcgaaagatgtcgggtggcgcatc
gattatcagatggttacgccggagttggccgccaaagctgtttccgcacatgtttataaa
gacgaaaaattctcggatcacgcccctttagttgtggagtatgactatgttgccgaataa
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