Neisseria perflava: LPB400_01435
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Entry
LPB400_01435 CDS
T07577
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
npf
Neisseria perflava
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npf03032
]
LPB400_01435 (topA)
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_01435 (topA)
Enzymes [BR:
npf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPB400_01435 (topA)
DNA replication proteins [BR:
npf03032
]
Prokaryotic type
DNA Topoisomerases
LPB400_01435 (topA)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB400_01435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QXW90730
UniProt:
A0ABD7EYP9
LinkDB
All DBs
Position
complement(269725..272031)
Genome browser
AA seq
768 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAVDPDNGFAMKYQLISRN
SKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKRGLKNIKPQRVVFHEITKN
AVLDAVTHPREIEMDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGAKLEQFDLPNEAAQADVLKELEG
KEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGFTTDRTMRTAQQLYEGIDVGQGAIG
LITYMRTDSVNLADEALTEIRHYIENKIGKEYLPSSAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDITVGKGVFRVTGQVQTFAG
FLSVYEESSDDEESEDSKKLPEMSEGDKLPVDKLYGEQHFTTPPPRYNEATLVKALEEYG
IGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQL
DEIANGKRQWIPVMDKFWKPFIKQVEEKEGIERAKFTTQELDETCPKCGEHKLQIKFGKM
GRFVACAGYPECSYTRNVNETAEEAAERIAKAEAEQAELDGRECPKCGGRLLYKYSRTGS
KFIGCANYPKCKHVEPLEKPKDTGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATW
NPPIAETCPKCAWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaacttattaatcgtcgaatccccgtccaaagccaaaaccctgaaaaaatat
ctgggcggtgattttgaaatcttggcgtcttacggccacgtccgcgatttagttccgaaa
agcggagcagtcgatcccgacaatggctttgccatgaagtaccagctgatcagccgcaac
agcaaacacgtcgatgccatcgttgctggtgccaaagaagctgaaaacatctacctcgca
accgacccggatagggaaggcgaagccatttcttggcatcttttggaaatcctcaaatcc
aaacgcggcctgaaaaacatcaaaccgcagcgtgtcgtgttccacgaaattaccaaaaac
gccgtactcgatgcggttacccatccgcgcgaaatcgaaatggatttggtcgatgcgcaa
caagcccgccgagctttggactatttggtcggtttcaacctctcgccattgttgtggaaa
aaaatccgccgcggtttgagcgcaggccgtgtacaaagtcccgctttgcgcctgatttgc
gagcgcgaaaacgaaatccgcgcgtttgaagcgcaggaatattggacggtacatctcgac
agccataaaggccgcagcaagtttaccgccaaacttgcccaatacaacggcgcgaaactc
gaacaattcgacctgccgaacgaagccgcgcaagccgatgtgttgaaagaactcgaaggc
aaagaggccgtcgttactgccatcgaaaagaaaaagcgcagccgcaatcccgccgcgccg
tttaccacatccaccatgcagcaggatgccgtgcgcaaactcggtttcactaccgaccgc
accatgcgtaccgcccagcagctttacgaaggtatagacgtagggcagggcgccatcggt
ctgattacctatatgcgtaccgacagcgtgaatttggccgatgaagcgttaaccgaaatc
cgccattacatcgaaaacaaaatcggcaaagaatatctgccaagttcggccaaacagtac
aaaaccaaatccaaaaacgcccaagaagcacacgaagcgatccgtccgacttccgtgtac
cgcacgcccgaaagcgtcaaacccttcttgagcgcagatcagttcaaactctatcaaatg
atttggcaacgtaccgttgcctgtcagatgacgcccgccaaatttgaccaaaccaccgtc
gatattaccgtcggcaaaggcgtgttccgcgtaaccggacaagtgcagactttcgcaggc
ttcttgagcgtgtatgaagaaagcagcgacgacgaagagagtgaagacagcaaaaaactg
cccgaaatgagcgaaggcgataaattgcctgtagacaaactttacggtgaacaacacttc
accactccgccgccgcgctacaacgaagccacgctggttaaagccctcgaagaatacggc
attggccgcccctccacctacgccagtattatttccacgctcaaagaccgcgaatacgtt
acccttgagcaaaaacgcttcatgcccaccgacacaggcgacatcgtcaataaattcctg
accgaacacttcgcccaatacgtcgattaccactttaccgccaaactcgaagaccagctt
gacgagattgccaatggcaaacgccaatggattcccgtgatggataaattctggaaacca
tttatcaaacaagtggaagaaaaagaaggtatcgaacgtgccaaattcaccacgcaggaa
ctcgacgaaacctgccccaaatgcggcgaacacaaactgcaaatcaagtttggcaaaatg
ggccgtttcgtcgcctgcgctggttatccagagtgcagctacacgcgcaacgtcaacgaa
accgccgaagaggccgccgagcgcatcgccaaagctgaagcagaacaagccgaactcgac
gggcgcgaatgccccaaatgtggcggacggttgttgtacaaatacagccgcaccggcagc
aaattcatcggctgcgccaactaccccaaatgcaaacacgtcgagccgctggaaaaaccc
aaagacaccggcgtccagtgcccacaatgcaaaaaaggcaacctcgtcgagcgcaaatcc
cgctacggcaaactgttttacagttgcagcacttatccggattgcaactacgcgacatgg
aacccacccattgcagaaacctgtccaaaatgcgcgtggccggttttgaccatcaaaacc
accaaacgctggggcgtggagaaagtctgcccgcaaaaagaatgtggttggaaagagcaa
attgaaccgcctgcaccgaaggaataa
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