Neisseria perflava: LPB400_01895
Help
Entry
LPB400_01895 CDS
T07577
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
npf
Neisseria perflava
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npf03016
]
LPB400_01895
Enzymes [BR:
npf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LPB400_01895
Transfer RNA biogenesis [BR:
npf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPB400_01895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QXW90810
LinkDB
All DBs
Position
complement(363849..365705)
Genome browser
AA seq
618 aa
AA seq
DB search
MNIFYEESGQFKVASIVQKNDATYQVDTQHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIALYAAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF
TKAADELKISAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLPLPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAIKQGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPSISIYFDVDSEFNVGAPTCKIEAVNIAENLRIQTIEP
HFNAKTGLDETGEMMFAHHQDLIWFYQFAIALQKARGKYEPDRAPQYDYSIELDEEGNVS
VVRRERGSPIDTLVSEMMILANSTWAQMLDENELPGLFRVQPAGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLISLIDDTAEPLYQNSDAELFAALRDFDAAYTAYADFQR
QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL
DAEKQFIALNYQKAVLPG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttttacgaagagtccggccaattcaaagttgcctccatcgtccaaaaaaac
gacgccacctaccaagtcgatacccaacacggcaaacgcaccaaagtgaaggcaaacaat
gtctttgccgagtttgacggcgatatggcggcatttttggagaacgcgcaggcacaggcg
gcggacatcgacaccgatttattgtgggaagtatgcggtgaagaggaatttaccgccgaa
gccatcgccgaagaatattacggccatgcgccgaccaaaaccgagctggcggcgactttg
attgcgctttacgccgcgccgatgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcaccggaagaaaccttaaaacaagcgcttgccgccatcgaacgtaaaaaacagcaagac
gcgcaaatcgacgcttgggcggaagccttgaaacgcggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcttacatgcgcccgacaagcaatcgctgacctacaaagccttt
accaaagccgccgacgagctgaaaatctccgcctacgaactggcgaaaaaaacgggcggc
attacgtccattccccaatacctgcaagatgggtttgaaatcaaatatttccccaaagga
acaggcttccccgaccttccgcttcctgaaatgcccgacttgcccaaggctgacgttacc
gccttttccattgacgacgaatcgactaccgaagtggacgatgccttgagcctgaccgac
ttgggcaatggcatgaaacgcgtcggtatccacatcgccgcgccgtcgcttgccattaaa
caaggcgacaaaatggaaaaaaacatcatggaacgcttgagcacggtctatttccccggc
ggcaaaatcactatgttgcccgaaaactggattgccgcgttcagccttgatgcaggcgca
taccgcccttccatcagcatttatttcgatgtggacagcgagttcaacgtcggcgcgcca
acctgcaaaatcgaagcggtcaacatcgctgaaaacctgcgcattcaaaccatcgagccg
catttcaacgccaaaactggcttggacgaaacgggcgaaatgatgttcgcccaccatcaa
gacctgatttggttctatcaattcgccatcgccctgcaaaaagcgcgtggcaaatacgag
cccgaccgtgcgccgcaatacgattacagcatcgaattggatgaggaaggcaacgtatcc
gtcgtccgccgcgaacgcggttcgcccatcgatacgctggtcagcgagatgatgattctt
gccaacagcacttgggcgcaaatgctggacgaaaacgagctgcccggccttttccgtgtc
caaccggcaggcaaagtacgcatgagcaccaaatccgagccgcacatcggcatgggcgtg
caacattacggctggtttacctcgccgctgcgccgcgccgccgactacatcaaccaaaag
cagctgatcagcctgatcgacgatactgccgagccactgtatcaaaacagcgatgccgag
cttttcgccgcactgcgcgactttgatgccgcctatacagcctacgccgacttccaacgc
caaatggaagcctactggagcctcgtatacctgcaacagcaaggcacgagcgagctgacg
gccaccatcctcaaagaagacctcgtccgcattgaaggcctgccgctggtaacgcgcgcg
accggtattccgtttgacgcactgccaaaatcgcaggcattgttcaaaatcaccgaactg
gatgccgagaagcagtttatcgcgctcaactatcaaaaagccgttttacccggctga
DBGET
integrated database retrieval system
