Neisseria perflava: LPB400_02690
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Entry
LPB400_02690 CDS
T07577
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
npf
Neisseria perflava
Pathway
npf03030
DNA replication
npf03410
Base excision repair
npf03420
Nucleotide excision repair
npf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB400_02690 (polA)
03410 Base excision repair
LPB400_02690 (polA)
03420 Nucleotide excision repair
LPB400_02690 (polA)
03440 Homologous recombination
LPB400_02690 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npf03032
]
LPB400_02690 (polA)
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_02690 (polA)
Enzymes [BR:
npf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB400_02690 (polA)
DNA replication proteins [BR:
npf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPB400_02690 (polA)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPB400_02690 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB400_02690 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QXW90961
LinkDB
All DBs
Position
528358..531153
Genome browser
AA seq
931 aa
AA seq
DB search
MSNKPTLLLVDGSSYLYRAYHAMGQNLSAPDGAPTGAMYGVLNMLRRLRADYVHDYCAVV
FDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLMGWPVLVIPQVEADDVIGTL
AKMASEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDIEGVKEKFGVRPDQIRDYLA
LMGDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAEIKGKVGENLQAALPQLPLSYD
LVTIKTDVDLHTELSDGLESLRRTTPKWAQLVVDFKRWGFRTWLKEAESRMHEAKNTDLF
GSEHIGEQAALAMETQPEKQPELAPAPEKLDYQAVTIEAQFAALLDKLSQADTIGIDTET
TSLDAMNASLVGISIAFQAGEAVYIPVGHSLTAAPEQLDLQDVLGRLKPHLENPTLKKIG
QNLKYDQHVFANYDIALNGIAGDSMLASYIIESHLGHGLDELSERWLGLETITYESLCGK
GAKQIGFADVAIEQATEYAAQDADFALRLDAHLRAQMDAKQLEMYEKMELPVAQVLFEME
RNGVQIDRAELARQSAELGAELMKLEQEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGL
KKTAKGGISTNEAVLEQLAPDYPLPKIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTY
AQAVAITGRLASNNPNLQNIPIRTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSG
DKTLITAFQNGEDVHRRTAAEVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGI
DNISAKNFIDRYFARYPGVAEYMQRTKEQAAAQGFVETLFGRRLYLSDIHNKNANTRAGA
ERAAINAPMQGTASDLIKRAMIDVSRWLSYDLLQTKLIMQVHDELVLEVPEAELDLVKEK
LPQIMAKVDEGMLNVPLVAEVGVGMNWEEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaacccacactccttctcgttgacggctcttcttatctttaccgcgcctat
catgctatgggacagaatttgtctgcgcccgacggtgcgccgactggggcgatgtatggc
gtgttgaatatgttacgccgcctgcgtgcggattatgtgcacgactattgcgcggtggtg
tttgacgctaaaggtaagaatttccgccatgagatgttccccgactataaagcgacgcgc
ccgccgatgccggacgatttgcgcccgcaggcggaagccttgccggatttggtccgcctg
atgggctggccggtgctggtcattccgcaggtagaagcggatgacgttatcggcactttg
gctaagatggctagcgaagcagggtggaacgtggtggtgtccaccggcgataaggacatg
gcgcagttggtgaatgagcgcgtgacgctggtgaacacgatgagcggcgaaacgctggac
attgaaggcgtgaaggagaaattcggcgtgcgccccgaccaaatccgcgattacctcgcg
ctgatgggcgacaaggtggacaacgtgccgggcgtggaaaaatgcggcccgaaaaccgcg
gtgaagtggctggaagcctacggttcgctggctggtgtgatggaacacgctgcggaaatc
aagggcaaggtcggcgaaaacctgcaagccgcgctgccccaactaccgctatcgtatgat
ttggtgacgattaaaaccgatgtggatttgcacaccgagctttcagacggccttgaaagc
ctgcgccgtactacgcctaaatgggcgcagctggttgtcgatttcaaacgctggggcttc
cgcacttggctgaaagaggcggaaagccgtatgcacgaagcgaaaaacactgatttgttc
ggcagcgagcatatcggcgaacaagctgcattggcgatggaaacgcagcctgaaaaacaa
cccgaacttgccccagcccctgaaaagctggattatcaagctgttaccatcgaagcgcag
tttgccgccttgttggacaaactgtcgcaggcggacaccatcggcatcgatacggaaacc
acgtcattagacgcgatgaacgcctcgctggtcggcatcagcatcgcgttccaggcaggc
gaagcggtttacatccctgtaggacacagcctgactgccgcacccgaacaacttgattta
caagacgtattaggccgtctgaaaccgcatttggaaaaccccaccctgaaaaaaatcggg
caaaacctcaaatacgaccaacacgttttcgccaactacgacatcgccctgaacggcatt
gccggcgattccatgctcgcttcctacatcatcgagagccatctcggacatggcttggac
gagttgtccgaacgctggctcggcttagaaaccattacctacgaatcgttgtgcggcaaa
ggtgcgaagcaaatcggttttgccgacgttgccattgagcaggcgaccgaatacgccgcc
caagacgcagatttcgccctgcgcctcgacgcgcacctgcgcgcgcaaatggacgccaag
cagcttgaaatgtatgaaaaaatggagctgcctgtcgcgcaggtattgtttgaaatggaa
cgcaacggcgtacaaatcgaccgcgccgaactcgcccgccaaagcgcagaactcggcgca
gagctgatgaagctcgaacaagaagcctacgccgccgcaggtcagccgttcaacctcaac
tcgcccaaacagctgcaagaaatcctgttcgacaaaatgggcatccccaccaaaggcctg
aaaaaaaccgccaaaggcggcatttccaccaacgaagccgtgctcgaacagctcgcgccc
gactaccccctgcccaaaatcatcctgcaaaaccgcagcctggcgaaactcaaatccacc
tacaccgacaaactgcccgaaatgatttcccccaaagacggccgcgtgcataccacttac
gcccaagccgtcgccattaccggccgcctcgccagcaacaaccccaacctgcaaaacatc
cccatccgcaccgcagaaggccgtcgcgtgcgtcgcgcctttaccgcaccgcaaggcagc
gtcatcgtttccgccgactattcgcaaatcgagctgcgcatcatggcgcacctctccggc
gacaaaaccctgattaccgcgttccaaaacggcgaagacgtacaccgccgcaccgccgcc
gaagtattcggcattgcccccgaaaacgtctcgtccgaacaacgccgctacgccaaaacc
atcaacttcggcctcatttacggcatgggccaatacggcctcgccaaatcattgggcatc
gacaacatctccgccaaaaactttatcgaccgctacttcgcccgctatcccggcgtcgcc
gaatacatgcaacgcaccaaagaacaagccgccgcgcaaggctttgtcgaaaccttgttc
ggccgccgcctctacctgtccgacatccacaacaaaaacgccaacacccgcgccggagcc
gaacgcgccgccatcaacgcccccatgcagggcaccgcctccgacctcattaaacgcgcc
atgatagacgtttcccgttggctttcatacgacctcctgcaaaccaagctgattatgcag
gtgcatgacgaattggtgttggaagtacccgaagccgagctggatttagtcaaagaaaaa
ctgccgcagattatggcgaaagtggacgaaggaatgttaaacgtgccgctggtggcggaa
gtgggtgtggggatgaattgggaagaggcgcattga
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