Neisseria perflava: LPB400_02720
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Entry
LPB400_02720 CDS
T07577
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
npf
Neisseria perflava
Pathway
npf03420
Nucleotide excision repair
npf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB400_02720 (uvrD)
03430 Mismatch repair
LPB400_02720 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_02720 (uvrD)
Enzymes [BR:
npf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB400_02720 (uvrD)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB400_02720 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LPB400_02720 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
DUF3553
YccV-like
Motif
Other DBs
NCBI-ProteinID:
QXW90966
UniProt:
A0ABD7EYS8
LinkDB
All DBs
Position
complement(535326..537533)
Genome browser
AA seq
735 aa
AA seq
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MFPNESAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLTTRIAWLLQSGQASVHS
IMAVTFTNKAAKEMQTRLGAMIPVNIRAMWLGTFHGLCHRFLRLHHRDAGLPSSFQILDS
GDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKEFGLRASVLSAPDPHTRRMIECYAEY
DKICQREGVVDFAELMLRSYEMLQNNEILRQHYQNRFNHILVDEFQDTNKLQYAWLKLIA
GNHAAVFAVGDDDQSIYRFRGANVGNMTALMGEFHIDAPVKLEQNYRSVGNILAAANSVI
ENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAQFIVDETKALEREGWDLDEIAVLYRSN
AQSRVIEQSLFRSGIPYKIYGGLRFYERQEIKHALAYLRLAVNPDDDNALLRVINFPPRG
IGARTIENLQTASNEQGITLWQAACNAGSKATKIAAFVRLIEALRNQVGQMPLSEIIVGI
LKDSGLTEHYRTPKGDNQDRLDNLDELVNAAIEFKPEDSNFETLPENISDDPAFPILAFL
SNAALESGENQAGAGEKAVQLMTVHASKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEE
RRLMYVAITRARKRLYITMAQQRMLHGQTQFGIVSRFVEEIPPEVLHYLSVKKPAYDSYG
NTRPTAVQRDKIIEDFKQPQTYAGFRIGQNVRHAKFGTGVIIDAVDKGESARLTINFGKQ
GVKELDTKFAKLEEM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccaacgaatccgcccccaacctcctgcaaggcttaaaccccgaacaactctcc
gccgtaacctggccgccgcaatccgccctcgttttggcaggcgcaggcagcggcaaaacg
cgcgtactgaccacgcgtatcgcctggcttttgcaaagcggacaagccagcgtgcacagc
attatggcggtaacgtttaccaacaaagccgccaaagaaatgcagacccgtttgggcgca
atgattccagtcaacatccgcgccatgtggctcggcacgttccacggcctctgccaccgc
tttttgcgcctgcaccaccgcgacgcaggcctgccctcttccttccaaatcctcgacagc
ggcgaccaactttccctgatcaaacgcctgctcaaaagcctcaacatcgccgaagaaatc
atcgcaccgcgttcattgcaaggctttatcaacgcgcaaaaagaattcggtttacgcgct
tccgtcttgagcgcacctgatccgcacacacgtcgcatgattgagtgctacgccgaatac
gacaaaatctgccaacgcgaaggcgtggtcgattttgccgaactcatgctccgcagctac
gaaatgctgcaaaacaacgaaatcctgcgccagcactaccaaaaccgattcaaccacatt
ctggtcgacgagtttcaagacaccaacaagctgcaatacgcgtggctgaaactgattgcc
ggcaaccacgccgccgtctttgccgtcggcgacgacgaccaaagcatttaccgattccgt
ggcgcaaacgtcggcaacatgaccgcgctgatgggagaattccacatcgacgcgcccgtc
aaactcgaacaaaactaccgctccgtcggcaacatcctcgccgccgccaactccgtcatc
gaaaacaacgacgaacgcctcggcaaaaacctgcgcaccgacgccgaagcaggcgacaaa
atccgctactactccgcctttaccgacctcgaagaagcccaattcatcgtggatgaaacc
aaagccctcgaacgcgaaggctgggatttggacgaaatcgccgtcctctaccgcagcaac
gcccaatcccgcgtcatcgaacaaagcctgttccgcagcggcatcccctacaaaatctac
ggcggcttgcgcttttacgaacgccaagaaatcaaacacgccctcgcctacctgcgtctc
gccgtcaatcccgacgacgacaacgccctcttgcgcgtgattaacttcccaccgcgcggc
atcggcgcacgcaccatcgaaaaccttcagacggcctcaaacgaacaaggcatcaccctc
tggcaggcagcctgcaatgccggctcaaaagccaccaaaatcgccgccttcgtccgcctg
attgaagcccttcgcaaccaagtcggacaaatgcccctgtccgaaatcatcgtcggcatc
ctcaaagacagcggactgaccgaacactaccgaaccccaaaaggcgacaaccaagaccgc
ctcgacaacctcgatgaactcgtcaacgccgccatcgaattcaaacccgaagacagcaac
tttgaaaccctgcccgaaaacatttcagacgaccccgccttccccatcctcgctttcttg
agcaacgccgccctcgaatccggcgaaaaccaagcaggcgcaggcgaaaaagccgtacaa
ctgatgaccgtccacgcctccaaaggtttggaatttaacgccgtcttcctcaccggcatg
gaagaaggccgcttccccagtgaaatgagccttgccgaacgcggcggcctcgaagaagaa
cgccgcctcatgtacgtcgccatcacccgcgcccgcaaacgcctctacatcaccatggcg
caacaacgaatgcttcacggacaaacccaattcggcatcgtctcccgcttcgtcgaagaa
atcccgcccgaagtattgcactatctgtccgtcaaaaaacccgcctacgacagctacggc
aatacacgcccaaccgccgtacaacgggacaaaatcatcgaagacttcaaacagccgcaa
acctacgcaggcttccgcatcggccaaaacgtccgccacgccaaattcggcaccggcgtc
atcatcgatgccgtggacaaaggcgaatccgcccgactgaccatcaacttcggcaaacag
ggcgtgaaagagctggataccaagtttgcgaaactggaagagatgtag
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