Neisseria perflava: LPB400_03340
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Entry
LPB400_03340 CDS
T07577
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
npf
Neisseria perflava
Pathway
npf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LPB400_03340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
npf02022
]
LPB400_03340
02035 Bacterial motility proteins [BR:
npf02035
]
LPB400_03340
Two-component system [BR:
npf02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LPB400_03340
Bacterial motility proteins [BR:
npf02035
]
Pilus system
Twitching motility proteins
LPB400_03340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_19
AAA_5
HTH_50
AAA_16
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QXW91076
UniProt:
A0A9X7WBV8
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All DBs
Position
664040..665668
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AA seq
542 aa
AA seq
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MNKLQEPVLVVDDEADIRDLMEMTLMKMGLRVDTAAGVEEAKDKLDNNDYSLVLTDMRMP
DGSGLEVVQYIDELMLDTPVAVITAFGNADQAVEALKAGAFDYLQKPITLSQLRSLVKSA
VSVSDNTAEPTPSEKVKSQPAPVSAALYKPEPQPAKPVVTPPKSVQSEFNRPLTVPEGLN
SLKERFSAGNINPALQQDAPILEGDDDMPRLLGTSPQMVEVRHLIRRLARSLVPVYISGE
SGTGKEQAARTIHELSDRADKPFIAVNCGAIPENLMESEFFGYKKGSFTGADQDRLGFFQ
HADGGTLFLDEVADLPLAMQVKLLRAIQEKAVRRIGDARETSVDVRIICATHKNLEALIE
SGAFRQDLYYRLNVVSLHMPPLREMREDLGALILYLLYKHRHGNQTYKLSPKAQEALLHY
SYPGNFRELENILERAVALTVGQVIQVDDLQIQNAPQVKAERSGFSFDDIAEPDARETTL
NHSPIPPFDPRTMQIQDYLDQVERSIIEQALQQTRYNRTQAAKLLGISFRSMRYRMERLD
IN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattgcaagagccggttttggttgtcgatgacgaggcagacatccgcgatctg
atggaaatgaccctgatgaaaatgggtctgcgcgtcgatacggcggctggtgttgaagaa
gctaaagataagctggacaacaacgattattcgctggtgttgaccgatatgcgtatgccc
gacggctccggtcttgaggtggtccaatacattgacgagttgatgctcgacacgcccgtc
gccgtgattacggctttcggcaatgccgaccaagccgttgaagccttgaaagcaggcgcg
tttgattatctgcaaaaaccgattacgctgtcgcagttgcgttcattggttaaatcggca
gtgtcggtttcagacaatactgccgaacccacgccgtctgaaaaagtcaaatcgcagcct
gcgcctgtttctgccgccctgtataaacccgaacctcagccggccaagcctgtcgttacg
ccgcctaagagcgtacagagcgaatttaaccggcctttgactgttccggaagggctcaat
tccttaaaagagcgtttttcggccggtaacatcaatcctgctttgcaacaagacgcacct
atattggaaggcgacgacgatatgccgcgcctgttgggtacttcgccgcaaatggtcgaa
gtacgccacctgattcgcagattggcccgcagccttgttcccgtttatatctccggcgag
tccggtacgggtaaagagcaagcggcacgtaccattcatgagttgtccgaccgcgccgac
aaaccgtttattgctgtcaactgcggagctattcctgaaaacctgatggaaagcgaattt
ttcggttacaaaaaaggcagctttaccggcgcagatcaagaccgtttaggttttttccaa
cacgccgacggcggcactttgttccttgatgaagttgccgatttgccgcttgccatgcag
gtcaaactcctgcgcgccattcaagaaaaagccgtgcgccgtatcggcgatgcgcgggaa
acctctgtggatgtgcgcattatttgtgcaacccataaaaacctcgaagctttgattgaa
agcggtgcattccgtcaggacttgtattaccgcctcaacgtagtctccctgcacatgccg
cctttgcgcgaaatgcgcgaagacttgggcgcactgattctgtatctgttgtataaacac
cgtcacggcaatcaaacctacaaactcagcccgaaagcccaagaagccctgttgcattac
agctaccccggcaacttccgcgagttggaaaatatccttgaacgcgccgttgcgttgacg
gtaggccaagtgatacaagtggacgacttgcagattcaaaacgccccacaggttaaggct
gaacgcagcggcttttcctttgacgatattgccgaacctgacgcgcgcgaaaccacgctc
aatcacagccccattccgccgtttgatccgcgtaccatgcagatacaggattacctcgac
caagtggaacgcagtatcatcgagcaggctttgcagcaaacccgttacaaccgtacccaa
gccgccaaacttttgggcatcagcttccgctctatgcgctaccgcatggaacgcttggac
atcaattaa
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