Neisseria perflava: LPB400_04660
Help
Entry
LPB400_04660 CDS
T07577
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
npf
Neisseria perflava
Pathway
npf03410
Base excision repair
npf03430
Mismatch repair
npf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB400_04660 (recJ)
03430 Mismatch repair
LPB400_04660 (recJ)
03440 Homologous recombination
LPB400_04660 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_04660 (recJ)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LPB400_04660 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LPB400_04660 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LPB400_04660 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QXW91313
UniProt:
A0ABD7EZJ8
LinkDB
All DBs
Position
978443..980143
Genome browser
AA seq
566 aa
AA seq
DB search
MSVKIQTRSINPTVFNDLLTAGTDPLIARLCAARDVQSPAELDDKLAALLPYQSLTNCEA
AAGRLADAIERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE
LAEIAAEQGVDLLVTVDNGIASIAGVARAQELGLDVIVTDHHLPAETVPDCIIVNPNQKG
CGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEPNLGDLLDLVALGTVADVVTLDH
NNRILVSQGLKRMRLGKMRPGIRALFDVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
GIACLLARDDTEAQELAAQLNNLNIERREIEQSMLQDALNAFPETLPSGQTTLVAYRDDF
HQGVVGIVASRLKDRFYRPTIVFAPADNGEVRGSGRSIPNLHLRDALDLVSKRHPDLILK
FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTFITDGSLPARDITLEQAQNL
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR
TVYRPVANEWRNNLELQLYIDYWEAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaaattcaaacacgttccattaatccgactgttttcaacgacttgctcact
gccggtaccgatcctttgattgcgcggctgtgtgctgcgcgtgatgtgcaaagtccggcc
gagttggacgacaagcttgctgcgcttttgccgtatcaatcgctgacaaactgtgaagcc
gccgccggacgtttggcggatgcgattgagcgtcaggaaaaaatcctgattgtcgccgac
tatgatgccgacggcgcaacggcgtgttccgtcggtatgagcggtttggcggcgatgggg
gcgaaagtggattttctcgtgcccaaccgctttgaacacggctacggcttaacgcccgaa
ctcgccgaaatcgctgccgagcaaggtgtggatttgttggtgacggtggataacggtatc
gccagcattgcaggcgtggcgcgtgcgcaggagttgggtttggatgtgattgtgaccgac
caccatctgcctgccgagaccgtgcccgactgcatcatcgtcaatccaaaccaaaaaggc
tgcggtttccaaagtaaaagcttggcgggcgtgggagtaattttttatgtattgatggct
ttgcgtgccgagctgcgccgccgcaattatttttcagacggcctgaaagagccgaatctg
ggcgaccttttggatttggtcgcactcggtaccgtcgccgacgtcgtcactctagaccac
aacaaccgtatcctcgtgtctcaagggttgaaacggatgcgtttgggcaaaatgcgcccc
ggcatccgcgccttgtttgacgtggcgcgacgagattggcgcaaggctcagccgtttgat
atgggctttgcgttgggaccgcgcatcaacgcggccggacggctggacgatatgtcggtc
ggcattgcctgtctgttggcgcgagatgacaccgaggcgcaggaactggcggctcagtta
aacaacctcaatatcgagcgccgcgaaatcgagcagtctatgctgcaagacgcgctgaat
gcttttcctgaaaccctgccttcaggtcagacgacgttggtggcgtatcgcgacgacttc
catcaaggcgtggtcggcattgttgccagccgcctcaaagaccgtttttatcgtccgacc
atcgtatttgcgcctgccgacaacggcgaagtgcgcggttcgggacgctccattcccaat
ttgcacctgcgcgatgctttggacttggtatccaaacgccatcccgatttgattttgaaa
ttcggcggacacgcaatggcggcgggtttgagcatactcgaacacaatattcctgcgttt
cagacggcctttgaagaagccgtacgcgagatggtgtgcgaagacgatttgtcgcaaacc
ttcatcaccgacggcagcctgcccgcacgcgacattacgctggaacaggcgcaaaacctt
gcccgacacgtttgggggcagggcttcgcgccgccgagttttaccgatgaatttcacgtt
gtccgccagcagcctctgggcgcggagggcaaacataaaaaagtctggctgcaaaaagac
ggctacgaatttgaagccatgttctggcgttgcagcgaagacattcccgaatacatccgt
acagtgtaccgtcccgttgccaacgaatggcggaataatctcgaattgcagctttatatc
gactactgggaagccgcgtaa
DBGET
integrated database retrieval system
