Neisseria perflava: LPB400_05955
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Entry
LPB400_05955 CDS
T07577
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
npf
Neisseria perflava
Pathway
npf00260
Glycine, serine and threonine metabolism
npf00460
Cyanoamino acid metabolism
npf00630
Glyoxylate and dicarboxylate metabolism
npf00670
One carbon pool by folate
npf00680
Methane metabolism
npf01100
Metabolic pathways
npf01110
Biosynthesis of secondary metabolites
npf01120
Microbial metabolism in diverse environments
npf01200
Carbon metabolism
npf01230
Biosynthesis of amino acids
npf01240
Biosynthesis of cofactors
npf04981
Folate transport and metabolism
Module
npf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB400_05955
09102 Energy metabolism
00680 Methane metabolism
LPB400_05955
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB400_05955
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB400_05955
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB400_05955
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB400_05955
Enzymes [BR:
npf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB400_05955
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QXW89576
UniProt:
A0A9X7F9K5
LinkDB
All DBs
Position
complement(1233619..1234869)
Genome browser
AA seq
416 aa
AA seq
DB search
MFSKSVTLAQYDPDLAAAIAQEDKRQQDHVELIASENYVSCAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGAEYVNVQPHSGSQANQAVYASVLKPGDTILGMS
LAHGGHLTHGASVNISGKLYNAITYGLDENEVLDYAEVERLALEHKPKMIVAGASAYALQ
IDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVPFCDFVTTTTHKTLRGPRGGVIL
CRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKEALQPEFKQYAKQVKINAAAMAEEL
VKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGI
RIGSAAMTTRGFNEADARVLANLVADVLANPEDEANLAKVREQVTALCDKYPVYGA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaaaagcgttaccctcgcacaatatgaccccgatttggcagcagccatcgcc
caagaagacaagcgccagcaagaccacgtcgagctgatcgcctctgaaaactacgtcagc
tgtgccgttatggaagcccaaggttcgcaattgaccaacaaatacgctgaaggctatcct
ggcaaacgctactacggtggctgcgaatacgttgatattgtcgaacaattggcgattgac
cgcgctaaagagttgtttggcgcagaatatgtcaatgtccaaccgcactccggttctcaa
gccaaccaagccgtgtatgcttctgttttgaaaccgggcgacaccattttgggcatgtct
ctggcacacggcggccacttgacccacggcgcaagcgttaatatctccggcaaactctac
aacgccattacttatggtttggatgaaaacgaagttctcgattatgccgaagtagaacgc
ttggctcttgaacacaaacccaaaatgattgtggccggtgcatctgcctacgcgctgcaa
atcgactgggcaaaattccgcgaaatcgccgataaagtcggcgcatacctctttgtcgac
atggcgcactatgccggtctgattgccggcggcgaatatcctaatccggtgccattctgc
gacttcgtaaccaccaccacccacaaaaccctgcgcggccctcgcggcggtgtgattttg
tgccgtgacaatacccacgaaaaagcgctgaactcttccatcttcccaagcctgcaaggc
ggaccgttgatgcacgttattgctgccaaagccgtagcgtttaaagaagcgttgcaacct
gagttcaaacaatacgcaaaacaagtgaaaatcaatgctgccgctatggcggaagagttg
gttaaacgcggtttgcgcatcgtttccggccgtaccgaaagccacgttttcctcgttgac
ctgcaaccgatgaaaatcaccggcaaagccgctgaagccgctttgggcaaagcgcacatt
accgtcaacaaaaacgccatcccgaatgatccggaaaaaccattcgttacttccggcatc
cgcatcggctccgccgccatgactacacgcggctttaacgaagccgatgcgcgcgtattg
gcaaacttggttgctgacgtattggccaaccctgaagacgaagccaatctcgccaaagtc
cgcgaacaagtaactgctttgtgcgataaatatccggtttacggcgcataa
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