Neisseria perflava: LPB400_06060
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Entry
LPB400_06060 CDS
T07577
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
npf
Neisseria perflava
Pathway
npf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LPB400_06060 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npf02000
]
LPB400_06060 (msbA)
Enzymes [BR:
npf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LPB400_06060 (msbA)
Transporters [BR:
npf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LPB400_06060 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_22
AAA_16
ABC_ATPase
AAA_25
RsgA_GTPase
AAA_28
AAA
AAA_15
NACHT
AAA_30
AAA_5
DUF4400
nSTAND3
AAA_18
AAA_24
AAA_29
AAA_7
NB-ARC
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QXW89596
LinkDB
All DBs
Position
complement(1258727..1260493)
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AA seq
588 aa
AA seq
DB search
MQTTQATSNWELYKRLLGYLKSYWKMFIVSVVAMLIVAGTMPAFGYLLKPLINEGFVDKN
MKSMSWLPLAIVALFFIRGLFNFINEYCTTYLSSHLVQRLRGEMFNKMMHLPTSYFSSNT
GGRLMSRILNDVNQITDAGFNVITVIAKDGVSVVGLLGLLTYLNWRLTLITFIILPVVAV
CIQTVSKRLRKLSANNQIYLGQLMQVLGESINGERVVKIYGGQDYENRRFNRIADDVRRN
LLKQVSASSAGTGITQLMASVALAAIIYAAARQAGLSGFSAGDFMSFLSSMIMMFDPIKR
MTGVMQSLQRGLAAAESVFTFLDQPEESNEGKQILSPNPGDIEFCNVVHRYPEAERNSLN
HINLLVPQGKVTALVGASGCGKTTLANMLPRFLNPDEGKVLIGGVNINEYTLESLRSRMA
FVGQNVVLFNGTIAENIAYAQADKFSEEEIINAAKAANAWEFIQKMPQGLHTEVGENGLK
LSGGQRQRLAIARALLKNAPILILDEATSALDNESERLVQTALENLMQNRTTLVIAHRLS
TIEKADNIVVMHEGNVVEQGTHHELINAGGRYSDLHSLSEKSAKPASK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaacacaagccacatccaactgggagctgtacaagcgtttgcttggatattta
aaaagctattggaagatgtttatcgtctccgtagtggccatgctgattgtcgccggtacg
atgccggctttcggttacttgctcaaacctttgattaatgaaggttttgtcgataaaaac
atgaaaagcatgtcatggttgccgctggcaattgtggcgctgtttttcattcgtggcctg
ttcaacttcattaacgaatattgcacgacttatctgtccagccacttggtgcagcgcttg
cgcggtgaaatgttcaacaaaatgatgcacctgccgacttcgtatttcagcagcaatacc
ggcggccgtttgatgtctcgtatcttgaacgacgtcaatcaaattaccgatgcagggttt
aacgtcattaccgtgattgctaaagacggcgtgagcgtagtcggcctattgggcttgcta
acttatctgaactggcgtttgaccctgattacttttattattttgccagtcgtcgccgta
tgtatccaaacggtcagcaaacgcttgcgcaaattgtctgccaacaaccaaatttatctt
ggccagctgatgcaggtcttgggcgagagcattaatggtgaacgcgttgtaaaaatctac
ggcggtcaagattatgaaaaccgccgcttcaaccgtattgccgacgatgtgcgccgcaac
ctgctcaaacaggtttctgccagctctgccggtaccggcattacgcaattaatggcttca
gttgctctggctgcaattatttacgcagcagcccgccaagcagggctttcaggatttagt
gcaggcgattttatgtcgtttttgtccagcatgatcatgatgtttgaccccatcaaacgc
atgaccggcgtgatgcaatccctgcaacgcggtttggcggcagctgaaagtgtcttcacc
tttttggatcaacctgaagaaagcaacgaaggcaaacagattctcagcccaaaccctggc
gatatcgaattttgcaatgttgtacaccgctatcctgaagccgaacgcaacagcttgaac
cacatcaacctgcttgtaccgcaaggcaaagtgactgcattggtcggcgcatcaggctgc
ggtaaaactaccttggccaatatgttgccgcgcttccttaatccggatgaaggcaaggtt
ttgatcggcggcgtcaacatcaatgaatatacgctcgaaagcctgcgcagccgtatggca
tttgtcggccaaaacgttgtcctgtttaatggtacgattgctgaaaacattgcctatgct
caagctgacaaattcagtgaagaagaaattatcaatgctgcaaaagccgcaaatgcttgg
gaatttatccaaaaaatgccacaaggcctgcacactgaagttggcgaaaacggtttaaaa
ctgtccggcggccaacgtcaacgcctcgccattgcgcgtgcgcttttgaaaaatgcgccg
attttgattttggacgaagccaccagtgcattggataatgaatccgaacgtttggtacaa
actgcattggaaaacctgatgcaaaaccgtaccacattggtgattgcccaccgactttcg
accatcgaaaaagccgacaacatcgttgtcatgcacgaaggcaatgtcgtcgaacaaggc
actcatcatgaattgatcaacgcaggtggacgctattccgacctgcacagcctcagcgaa
aaatcagccaaaccggcaagcaagtag
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