KEGG   Neisseria perflava: LPB400_07260
Entry
LPB400_07260      CDS       T07577                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
npf  Neisseria perflava
Brite
KEGG Orthology (KO) [BR:npf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:npf02048]
    LPB400_07260
Enzymes [BR:npf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LPB400_07260
Prokaryotic defense system [BR:npf02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LPB400_07260
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII EcoR124_C HSDR_N DEAD AAA_22
Other DBs
NCBI-ProteinID: QXW89809
UniProt: A0ABD7EVT9
LinkDB
Position
1505382..1508450
AA seq 1022 aa
MFNKEADFENALIALLSTKSWEKEVLRYPTEEKLIANWQEHLNKTNQHIDKLDVPLLRTE
MNQILEQVQALKTPYALNGFINGKTVAIKRENEESRHFGKEVSLDIFDREEISAGKSRYQ
IAQQPQFTPRSDLYPKQRGDLMLLINGMPMFHIELKRSGVGNISQATNQIERYHKAGAFS
GIFSLVQVFVAMTPEECRYFANTGGQLNPAFYFRWADFNNVYMNDWDKVATHFLSIPMAH
QFIGDYTIADAKDEQLKVLRSYQYYAVNKIADTVAKTDWTSGNQRGGYIWHTTGSGKTMS
SFKSAQLISRRKDADKVIFLLDRIELGKQSLEEYQNFADSKDDVQATENTAILLAKLKSK
QDRDRLIVTSIQKMSNIKAEEGVNEADIEQISGKRLVFIVDEAHRTTFGDMLLTIKHTFP
NAIFFGFTGTPIEEENAKKSSTTATVFGNELHRYSIADGIRDENVLGFHPFHIRTFKDSD
LRRSVALQEAKAADESEVFADDQKKKIYNQFMNDVPMAGEYTSDGKYRKGIEDYIPNVQY
QTPEHVNAVIDDMLDNWPRLSQGKKYHAIFATSSIPEAVNYYRLIKARNSGLKLTALFDP
NILNDGQGNDKEEWIAEILNDYNAQFGTSFGYATYSRFKTDLSDRLSHINAYKRIKPDEQ
LDLLIVVDQMLTGFDSKWLNTLYLDKILDYANLIQAFSRTNRLCDKTDKPFGLIRYYRKP
HTMQRNIERAVKLYSGDRPMGLFVDNLDKVIDKMNVCFADIADIFKWAGLEDFSKNPEDT
TSCAKFVKLFNQLNEHLQAARLLGFSWEKSSYDVVQEDDSVITATLNFDQETYDKLLARY
KDLFKENLSNGGGNDDVPFDLRSHINEIETDKIDQNYMNARFEKWLKTIGGIEEAAALEE
LHHSFATLSKEDQKFAELFLHDVQSGDIKLDPNLALSDYITTYKQKDANDKVLKVIKGLG
LDGDLLRALLARKYTSENLDLGRLNDLKATVDREKAKVYFNEERIFYLNIRIDEFLRELI
TR
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgtttaataaagaagctgattttgaaaatgcactgattgccttgctgtccactaaaagc
tgggaaaaggaagtgttgcgctatcccaccgaagaaaagttaattgccaactggcaggag
catttgaataaaaccaaccaacatatcgacaagctcgatgtgccgttgcttcgcacggaa
atgaaccagattttggagcaggtgcaggcattgaaaacgccttatgcgttaaacggcttt
atcaacggcaaaacggtggcaatcaagcgtgaaaatgaggaaagccgtcatttcggcaag
gaagtgtcgttggatattttcgaccgtgaggaaatttctgccggcaaaagccgctatcaa
attgcccagcagccccaatttactcctcgttcggatttataccctaagcagcgcggcgat
ttgatgttgttaattaatgggatgccgatgttccatattgagctgaaacgctcaggagtg
ggcaacatcagtcaagcgaccaatcaaattgagcgataccataaggcaggcgcgttttct
ggcatttttagcctggtgcaggtgtttgtggcgatgacgccggaagaatgccgctatttt
gccaataccggcggtcaattaaatcctgcgttttatttccgttgggcggatttcaataat
gtgtatatgaacgattgggacaaggtggcgacgcatttcctctcgattccgatggcacac
cagtttatcggcgattacaccattgccgatgcgaaagacgagcagctgaaagtgttgcgc
agctatcagtattatgcggtcaacaaaattgccgacacggtggcaaagacagattggact
tcgggcaatcagcgcggtggctatatttggcataccacaggatcgggaaaaacaatgtcg
agttttaaatcggcgcagttaatcagccgccgtaaagatgcggataaggtgattttcttg
ctcgaccgtattgagctgggcaagcaatcgctggaggaatatcagaattttgccgacagc
aaggatgatgtacaggcaacggaaaacaccgccattttgctcgccaagctgaaaagcaaa
caagaccgcgaccgcttaatcgttacctccattcaaaaaatgagtaatatcaaggcggaa
gaaggagtcaatgaggctgacatcgagcaaatcagtggtaaacgtttggtgtttatcgtt
gatgaagcccaccgcactacttttggcgatatgttgctcaccattaagcacaccttcccc
aatgcgattttcttcggctttaccggcacgccgattgaagaagaaaacgctaagaaaagt
tcaaccactgccacggttttcggcaatgaattgcaccgctattcgattgcagacggcatt
cgtgatgaaaatgtgctgggctttcaccccttccatatccgcacctttaaagacagcgat
ttacgcagatctgtcgctttgcaagaagccaaagcagcagatgaaagcgaagtatttgcc
gatgaccaaaagaaaaaaatctacaatcaatttatgaatgatgtgccgatggcgggagaa
tatacttcagacggcaaatatcgaaaaggcattgaagattatatacccaatgtgcaatat
caaacgccggaacatgtgaatgcggtgattgacgacatgctggataattggccacgcctc
agccaaggcaaaaaatatcatgccatttttgccaccagctctattcccgaagcggtcaat
tattatcgcttaattaaagccagaaattccgggctgaagctgactgcccttttcgatccg
aatattcttaacgatggtcaaggcaacgataaggaagaatggattgccgaaattttgaat
gattacaacgcccagtttggcacaagcttcggctacgccacttattcccgatttaaaacg
gatttgtcggataggttgtcgcatatcaatgcgtataagagaattaaacccgacgagcag
ctggatttgttgattgtggttgatcagatgctgacgggcttcgacagcaaatggctcaat
acgctctatctagacaaaattttggattacgccaacttgattcaggcattttcccgcact
aaccgcttatgcgacaaaaccgataaaccttttggtttaatccgctattaccgtaagccg
catacgatgcaacgcaatattgagcgagccgtaaaactttattcgggcgaccgtccaatg
gggctgtttgtcgataatttagataaagttatcgacaaaatgaatgtctgttttgccgat
attgccgatattttcaaatgggcaggattagaggatttttcaaaaaatcctgaagataca
acctcatgcgcaaagtttgtcaaactattcaatcagctcaatgagcacttacaagctgct
cggctcttgggcttttcttgggaaaaatcaagctatgacgtggtgcaggaagacgacagc
gtgatcactgccacactcaatttcgatcaagaaacctacgataaactgctggctcgttat
aaagatttgtttaaagagaatctaagcaatggtggcggtaacgatgatgtgccatttgat
ttgcgttcacacatcaacgaaatcgaaaccgataaaattgatcaaaattatatgaatgcc
cgttttgaaaaatggcttaaaaccatcggcggcatagaagaagctgctgcacttgaggaa
ctacaccactcttttgctacgctttctaaggaagatcaaaaatttgctgagttgttttta
catgatgtgcaatccggcgatatcaagcttgatccaaatttagcattaagtgattacatc
accacgtacaaacaaaaagatgccaatgataaggtgctaaaagtaattaaaggtttaggg
ctggatggagatttgctacgtgcgctgttggcaagaaaatataccagcgaaaatttggac
ttaggcagactaaatgacctaaaagcaacagtcgatagggaaaaagccaaagtttatttt
aacgaagaacgtatattttatttaaatatacggattgatgaattcctaagggaactaatt
acaagatag

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