Neisseria perflava: LPB400_07740
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Entry
LPB400_07740 CDS
T07577
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
npf
Neisseria perflava
Pathway
npf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB400_07740 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npf03019
]
LPB400_07740 (pnp)
03016 Transfer RNA biogenesis [BR:
npf03016
]
LPB400_07740 (pnp)
Enzymes [BR:
npf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LPB400_07740 (pnp)
Messenger RNA biogenesis [BR:
npf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPB400_07740 (pnp)
Transfer RNA biogenesis [BR:
npf03016
]
Prokaryotic type
tRNA degradation factors
LPB400_07740 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
DUF5813
Methyltransf_FA
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QXW89899
UniProt:
A0ABD7EW40
LinkDB
All DBs
Position
complement(1617297..1619417)
Genome browser
AA seq
706 aa
AA seq
DB search
MFNKHVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVLVAVTTNKEVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGVYVLNPTKAELAKSQLDLVVA
GTSKAVLMVESEADILSEEVMLGAVVYGHDQMQVAINAINEFADEVNPEVWDWKAPETNE
ELVAKVREIAGETIKEAFKIRQKQARSAKLDEAWNAVKEALITEETDTLAANEIKGIFKH
LEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGVLPRTHGSALFTRGETQALAVATLGTS
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRVGAPKRREIGHGRLAKRALLAVLPEPE
DFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILDNNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALAQAKEARLHILDQMKA
AVAGPQELSAHAPRLFTMKINQDKIRDVIGKGGETIRSITAETGTEINIAEDGTITIAAT
TQEAGDAAKKRIEEITAEVEVGKVYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHER
VRNVSDYLQVGQVVNVKALEVDDRGRVRLSIKALLEAPAREEKAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaacacgttaagaccttccaatacggtaatcaaaccgttactttggaaacc
ggcgaaatcgcccgccaagccgctgctgccgttaaagtatccatgggcgacaccgttgtt
ttggttgctgtgactaccaacaaagaagtgaaagaaggccaagacttctttcctctgact
gtcgattaccttgagcgtacttacgcagcagggaaaatccccggcggtttcttcaaacgc
gaaggcaaacaaagcgaaaaagaaatcctgaccagccgtctgatcgaccgtccgattcgt
cctttgttccctgaaggtttctatcacgacatccaaatcgtagcgatggtggtgtctgtt
gaccctgaaattgattctgacattcctgcaatgttgggtgcatctgccgcgctggtgttg
agcggcgtaccgtttgccggtccgattggcgcggcacgcgtaggttatgtaaacggcgtg
tacgttttgaatccgactaaagccgaattggctaaatcacaattggacttggttgttgcc
ggtacttctaaagccgtgttgatggtggaatccgaagccgacatcttgtctgaagaagtg
atgctgggtgcggttgtttacggtcatgatcaaatgcaagtggccattaatgccatcaat
gagtttgccgacgaagttaatccggaagtttgggattggaaagcacctgaaaccaatgaa
gaattggttgcaaaagtacgcgaaattgccggcgaaaccattaaagaagcgttcaaaatc
cgtcaaaaacaagcgcgttctgccaaattggacgaagcttggaatgctgtaaaagaagcg
ttgattaccgaagaaaccgacactttggcagccaacgaaatcaaaggcattttcaaacac
ttggaagccgatgttgtccgcagccaaattttggacggccaaccgcgtatcgacggtcgc
gacacccgcactgttcgtccgttgaacattcaaaccggcgtattgccgcgcactcacggt
tctgcactgtttacccgtggcgaaacccaagctttggcggttgcaactttgggcacttca
cgcgacgagcagatcattgatgcactgtccggcgaatacaccgaccgcttcatgctgcac
tacaactttccaccatactctaccggtgaagtgggtcgcgtaggtgcgccaaaacgtcgt
gaaatcggtcacggccgcttggctaaacgtgcattgttggccgtattgccggaacctgaa
gatttcagctacaccatgcgcgtggtttctgaaattaccgaatccaatggctcttcctct
atggcttccgtctgcggcggctgcctgagcctgttgtctgccggtgtgcctttgaaagca
cacgttgccggtatcgccatgggtctgattttggacaacaacaaatttgccgtcctgacc
gacatcttgggtgacgaagaccacttgggcgatatggactttaaagtagccggtacaacc
gaaggtgtgaccgcactgcaaatggacatcaaaatccaaggtattaccaaagaaatcatg
caaatcgctttggctcaagccaaagaagcacgtttgcacatcttggatcagatgaaagcc
gctgttgcaggcccgcaagaactgtctgcacacgcgccacgcttgttcaccatgaaaatc
aaccaagacaaaatccgtgatgtgattggtaaaggcggtgaaactattcgttcgattact
gctgaaaccggtactgaaatcaacatcgctgaagacggtaccatcactatcgctgcgact
actcaagaagcaggcgatgcagcgaaaaaacgtatcgaagaaatcactgccgaagtggaa
gtgggcaaagtgtacgaaggtactgtggttaaaatcctcgacaacaacgttggtgcgatt
gtcagcgtgatgccgggcaaagacggtttggtacacatcagccaaatcgcccacgagcgc
gtacgcaatgtcagcgactacctgcaagtaggtcaggttgtgaacgtgaaagcattggaa
gtagacgatcgcggccgagtacgcctgtctatcaaagctttgctagaagctcctgctcgc
gaagagaaagcagctgaataa
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