Neisseria perflava: LPB400_10845
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Entry
LPB400_10845 CDS
T07577
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
npf
Neisseria perflava
Pathway
npf03030
DNA replication
npf03430
Mismatch repair
npf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB400_10845 (dnaE)
03430 Mismatch repair
LPB400_10845 (dnaE)
03440 Homologous recombination
LPB400_10845 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npf03032
]
LPB400_10845 (dnaE)
03400 DNA repair and recombination proteins [BR:
npf03400
]
LPB400_10845 (dnaE)
Enzymes [BR:
npf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB400_10845 (dnaE)
DNA replication proteins [BR:
npf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB400_10845 (dnaE)
DNA repair and recombination proteins [BR:
npf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB400_10845 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF7398
HROB
Motif
Other DBs
NCBI-ProteinID:
QXW90462
UniProt:
A0ABD7EXF3
LinkDB
All DBs
Position
2259864..2263298
Genome browser
AA seq
1144 aa
AA seq
DB search
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGA
GIKPIGAADVWIGNPNASDKPFRAMLIIRNDAGYLRLSELLTEAYVGKDRNIHHAELNPE
WLENGDNSGLICLSGAHYGEVGVNLLNSNEDAARAAALKYAAWFPDAFYLELQRLPERPE
WEACVSGSVKLAEELDLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS
QFFIPPETMLERFADLPEALENTVEIAKCCNLHITLGKNFLPLFPTPDGLSLDDYLVKLS
NEGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMEFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE
YVREKYGAEAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLSLEKA
MEAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKSTTGDIVDVGKIPLDDQAAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVE
SIIAARQSGGKFTGLLNFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMN
NADQKAANANQGGLFDMMEDAIEPVQLVDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTKLGRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQIEIMVSGHTLE
NCADYLKSDQVLIIESKVSRDDYGGGDGLRIMANQVMTLQMARERYARSLSLALAPGHDI
TRLAAILTTHRLPDTSHIPLQLSYSNGKASGKLKIAPKWIVTPSTALFDELETLLGSRAV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgacctacatccccctgcgcctgcataccgaattctcgattaccgacggt
atggtgcggattaaaaaactgattgccaaagcgcaggaatacggtttacctgctttgggc
atcagcgatttgatgaacgaattcggcttggtgaaattctataaagcctgccgcggtgca
gggattaagcccatcggcgcggcagatgtgtggataggcaatccgaatgcgtccgacaag
ccgtttcgtgccatgctgattatccgcaacgatgcgggctatctgcgcttgagcgaactt
ttgacggaggcctatgtcggcaaagaccgcaatatccatcatgcggaacttaatcccgaa
tggctggaaaacggcgacaacagcggcttgatttgcttgagtggcgcacattacggcgaa
gtgggcgtgaatcttttgaacagcaacgaagacgcagcgcgtgcggcggcgttgaaatat
gcggcatggtttcccgatgcgttttatttagagctgcaacgcctacccgaacgacccgaa
tgggaggcttgcgtttccggcagcgtgaaactggcagaggaattggatttgccggtggta
gcgacgcatccgactcagtttatgagccgcgacgatttcaacgcgcacgaggcgcgggtg
tgcatcgcaggcggctgggtgctgacggacaagaaacgtccgcgcgattttacgccgagc
cagtttttcattccgccggaaacgatgctggaacgtttcgccgacttgcccgaagccttg
gaaaacacggtggaaattgccaaatgctgcaatctgcacatcacattgggcaaaaacttc
ctaccgctcttccctactccggacggtctgtcgctggacgattatttggtgaagctgtcc
aacgagggtttgcaggaacgcatggttcagctttatcccgacgaggcggagcgtgcggca
aaaatgccggaatatcaagaacgtttggattttgagctgaacatcatcatccagatggaa
ttccccggctatttccttattgtacaagactttatcaactgggcgaaaacgcacggctgt
ccggtcgggccgggccgtggttcgggtgcaggctcgctggtggcgtattcattgaagatt
accgaccttgatccgctcaaatacgcgctactgtttgaacgtttcttaaaccctgaacgc
gtctccatgcctgactttgacgttgacttctgtcaggcaaaccgtggccgcgtgattgaa
tatgtgcgcgaaaaatacggcgcggaagcggtcagccagattgttaccttcggcacgatg
tcgtccaaagcggtcatccgcgacgtgggacgcgtgctggaactgccgtttatgctgtgc
gacaaactgtccaagctgattccgttggaagccaacaaacccctgagtttggaaaaagcc
atggaggccgagccgcaaattcaggaattaattgaagcagaagaagcggacgaactgatt
acgctggcgaaaaagctggaagacctgacgcgcggtctgggtatgcacgcgggtggcgtg
ttaattgcgccgggcaagatttccgattacagccccgtgtatcaggcggacgaatccgcc
tcgcccgtatccatgtacgacaagggcgacgtggaagacgtgggtttggtgaaattcgac
tttttgggtctgcgcaacctgaccattatcgaaatggcgcagaacaacatcaaaagcacc
accggcgatatcgtcgatgtcggcaagattccgcttgacgaccaggccgcctaccaaatc
ttccgcgatgcgaacaccaccgccgtcttccagtttgagtcgaccggcatgaaaaaaatg
ctgaaaacggcgcatacgaccaagtttgaagaactcatcgccttcgtatcgctctaccgt
cccggcccgatggacaacattcccgacttcgtcgcgcgtatgaaaggccaagaattccaa
tacatccatccgctgctcgaaggcatcctcgcgccgacctacggcattatggtgtatcag
gaacaagtgatgcaggcggcgcagattatcggcggttactcgctcggcggcgcggacttg
ctgcgccgcgccatgggtaagaaaaagcctgaagaaatggtgaaacaccgcgaaatcttc
gccgaaggcgcggcaaaacaaggtatttcgcgcgaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctatcagaccgcatggctcaaagcccactatcccgccgaatttatggcggcaaccatg
tcgtctgaattggacaataccgaccagctcaaacatttctacgacgactgccgcgccaac
ggcatcgagttcctgccgcccgacatcaacgaatccgactaccgcttcacgccgtatccg
aacatgaaaatccgctacgcactcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcatcgccgcgcggcaaagcggcggcaagtttaccggcctcttgaacttctgcgag
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgaccttgccatgaac
aacgccgaccaaaaagccgccaacgccaatcagggcgggcttttcgacatgatggaagac
gccatcgaaccggtgcagctcgtcgatgcccccatgtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttctacctctccggccacccgttcggcccttatgcccaa
gaagtccgccaaatcgccccgaccaaattaggccgtctgaaaccgcaagacagcgtgcgc
ctcgccgggttcgttaccgccgtgcgcaccatgatgggcaaacgcggcaaaatcgccttc
gtcagcctcgaagatttgagcggacagattgaaatcatggtcagcggccacacgctggaa
aactgcgcagactacctcaaatccgaccaagtgctgattatcgaatccaaagtcagccgc
gacgactacggcggcggcgacggactgcgcatcatggcaaaccaagtcatgaccctgcaa
atggcgcgcgaacgctacgcccgcagcctcagcctcgccctcgcccccggccacgacatc
acgcgcctcgccgccatcctcactacacaccgcctgcccgacacgtcgcacatcccgctg
caactatcgtacagcaacggcaaagcatcgggtaaattgaaaattgcgcccaaatggatt
gtaacgccaagcaccgccttgtttgacgaactggaaacattgctcggcagcagggcagtt
cgtgtgaattggtaa
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