Natronomonas pharaonis: NP_0112A
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Entry
NP_0112A CDS
T00279
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
nph
Natronomonas pharaonis
Pathway
nph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NP_0112A (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_0112A (rpoB1)
Enzymes [BR:
nph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NP_0112A (rpoB1)
Transcription machinery [BR:
nph03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NP_0112A (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-ProteinID:
CAI48147
UniProt:
A0A1U7ETC6
LinkDB
All DBs
Position
49016..50848
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AA seq
610 aa
AA seq
DB search
MSQGQGRDAKVYVNGSLIGTHPDPHKLANDIREARRRGEVDEMVNVSVRDRTDEVIVNAD
AGRARRPLIVVEDGEPLLGDAEIEALEDGELEFEDLVDRGYVEFIDAEEEEDIYVAVDED
DLSEDHTHLEVDPQLMFGIGAGMIPYPEHNASPRITMGSGMIKQSLGLPSANYRIRPDTR
QHLLHYPQLSIVKTQTTEQIGYDDRPAAQNFVVAVMSYEGFNIEDALVMNKASIERALAR
SHFFRTYEGEERRYPGGQEDHFEIPDDEVRGARGEEAYSHLDEDGLVNPETHVGENDVLL
GKTSPPRFLEEPDDMGGLSPQKRRETSVTMRSGESGIVDTVTLMEGEDGSKLSKVKVRDE
RVPELGDKFASRHGQKGVVGHLAPQEDMPFTQDGVVPDLILNPHALPSRMTVGHILEMLG
GKVGSLEGRRVDGTPFQGEDEDELRESLIDRGFKSNGKEVMYSGITGEKIEAEIFVGVIF
YQKLYHMVSNKLHARSRGPVQVLTRQPTEGRAREGGLRIGEMERDVFIGHGAAMTLKERL
LDESDREDIYVCGQCGMSAVENVEQRRVYCPNCDEETDVHEVEMSYAFKLLLDEMKALGI
APRIELEDAV
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggacaaggacgagacgccaaagtctacgtaaacgggagcctcatcggcacc
catccggacccgcacaaactcgcaaacgacattcgggaggcccgccgccgcggcgaggtc
gacgagatggtcaacgtctcggtgcgcgaccgcaccgacgaggtcatcgtcaacgccgac
gccggccgcgcccggcggccgcttatcgtggtcgaagacggcgagccgctgctcggtgac
gctgaaatcgaagccctcgaagacggcgagctcgaattcgaagacctcgtcgaccgcggc
tacgtcgagttcatcgacgccgaggaggaagaggatatctacgtcgccgtcgacgaagac
gacctgagcgaagaccacacccacctcgaagtcgacccgcagctgatgttcggtatcggt
gcgggcatgattccgtaccccgagcacaacgcctcgccacggattacgatggggtcgggg
atgatcaagcagtcgctggggctcccctccgcgaactaccggattcgccccgacacccga
cagcacctgctgcattatccgcagctgtcgattgtcaagacgcagacgacagaacagatc
ggctacgacgaccggccggcggcacagaacttcgtcgtcgccgtgatgagctacgagggc
ttcaacatcgaggacgccctcgtgatgaacaaggccagcatcgaacgcgcgctggctcgg
tcacacttcttccggacctacgaaggcgaggagcgacggtatccgggcggccaagaggac
cactttgagattccggacgacgaggtccgtggcgcacgcggtgaggaagcctacagccac
ctcgacgaggacggactggtcaaccccgagacgcacgtcggcgaaaacgacgtcctgctc
ggcaagacatcgccgccgcggttcctcgaagagccagacgacatgggcggactttcgccc
cagaaacggcgcgaaacgtccgtgacgatgcggtccggcgagtccggtatcgttgacacc
gtcacgctgatggagggcgaagacggctcgaagctctcgaaggtcaaggtccgcgacgag
cgggtgcccgaactcggcgacaagttcgcatcgcggcacggccagaagggtgtcgtcggc
caccttgcgccccaagaggacatgccgttcacgcaggacggcgtcgtgccggacctcatc
ctgaacccgcacgcgctgccgtcccggatgacggtcggacacattctggagatgctcggc
ggcaaggtcggctcgctcgagggccggcgtgtcgacggcacgccgttccagggggaagac
gaagacgagctcagagagtcgctcatcgaccgcggtttcaaatccaacggcaaggaggtc
atgtactccggtatcaccggcgaaaaaatcgaggcggaaatcttcgtcggcgtcatcttc
tatcagaagctctaccacatggtctccaacaagctgcacgcccgctcccgtgggccggtg
caggtgcttactcggcagcccaccgagggtcgagcccgcgaaggtgggctccgtatcggt
gagatggaacgggacgtcttcatcggccacggcgcggccatgacgctcaaagagcggctg
cttgatgagtcagaccgggaggacatctacgtctgcggacagtgtggtatgtcggccgtc
gaaaacgtcgagcaacgccgcgtctactgtccgaactgcgatgaggagaccgatgtccac
gaagtcgagatgagctacgcgttcaagctcctgctcgatgagatgaaagcgctcggtatc
gccccccgaatcgaactggaggacgcagtataa
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