KEGG   Natronomonas pharaonis: NP_0116A
Entry
NP_0116A          CDS       T00279                                 
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A'' (intein-containing)
  KO
K03042  DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
Organism
nph  Natronomonas pharaonis
Pathway
nph03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nph00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NP_0116A (rpoA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nph03021]
    NP_0116A (rpoA2)
Enzymes [BR:nph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NP_0116A (rpoA2)
Transcription machinery [BR:nph03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     NP_0116A (rpoA2)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 Intein_splicing LAGLIDADG_3
Other DBs
NCBI-ProteinID: CAI48149
UniProt: A0A1U7ETD5
LinkDB
Position
54020..56704
AA seq 894 aa
MTEITDDVEAIVEDTDLPRRLKDEVYETLESRSGVAPEDVEDIVQAVESQYLETRVDPLD
PVGTVSAQSIGEPGTQMSIPADEQVVVRRNGETELTEIGPLVDSLMDSRETRSFDDHEVT
LAPDGIEVPSLSSEETVEWKPIEEVSRHETPDELLRFELESGRSIRATKAHSFVTRQENE
VVPVAGEELEAGDWLPVVASLDATDTQETVDLRKYLPAGDYWYTSVLADGGAEAVPGGPD
QLRNKRAALEAGELAEHTAYPVQGTVGLPEQFPLDEETGFFVGAWLAEGSLADHYVSISN
VDAAFQSRIRSFAERFDLTVNEYENDSGFAAGYDIRLNGTILSDFLRAACTDDGEKSIPG
FAIGANEAFLKGLLQGYFSGDGNVGTNAIRSSSTSDRLTAGVGLLLARFDVYATLGQQED
SRTLRVPKKHVSRFDNRIGMVGERGAELEALAESADSDGPDATDQIPNFGDALEAVAEAA
DIPQRQVNSATKRQRIDRSRLARLVAAAEAELDGEQSELDALRQAVTGDVVWDRIESIET
VESDHEYVYDVSVEGLETFTTADGVVTHNTMNTFHYAGVAEIDVTQGLPRLIELVDARKT
PDTPMMTVHLEGEYARDRERAHEVVWKIEATKILALGDVSTNVADMLVQIDLNEETLAER
WPTMESIDDIAGRIAGTIEGELGVDTARPKPTVIEFGPEEPSYRQLLQLVEELREIVFKG
IEEINRVVIRKEETEQGEEFVLYTEGSDLKEVLDIEGVDASRTTCNNIHEIHNNLGIEAA
REAIIEETMNTLEEQGLDDVNIRHLMLVADIMTNNGEIESIGRHGISGNKDSVLARAAFE
VTVNHLLDAAIHGEVDDLDGVTENVIVGKPIKLGTGDVDLRMGATRDSGSRADD
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgactgagattaccgacgacgtcgaggccatcgtcgaggataccgacctgccgcggcgg
ctgaaagacgaggtctacgagacgctggaatcgcgaagcggcgtcgcgcccgaggatgtc
gaagacatcgtacaggccgtcgagtcgcagtatctcgaaacgcgggtcgacccgctcgac
cccgtcggaaccgtctcggcacagagtatcggcgaacccggaacgcagatgtcgattccg
gccgacgagcaggtcgtcgttcgaaggaacggcgagaccgagctgacagagatcggtccg
cttgtcgatagcctcatggatagccgcgagacgcgttcgttcgatgaccacgaggtcaca
ctggcccccgacggtatcgaggtgccgagcctttccagcgaggaaaccgtcgaatggaag
ccaatcgaggaggtcagccgacacgagacgcccgacgagctgctccgatttgagctggaa
tccggacgctcgatccgggcgacgaaggcccactcgttcgtaacgcggcaggaaaacgag
gtcgtccccgtcgccggtgaggaactcgaggccggtgactggctgccagtcgtcgcatcg
ctcgatgcgaccgatacccaagagacagtagacctccggaagtatctaccggcaggcgac
tactggtatacctctgtgctcgcggacggcggcgctgaggcagtacccggcggaccggac
cagcttcggaacaagcgcgcggcgctcgaagccggcgaacttgccgagcacacggcgtat
ccggtccaagggactgtcggactgccggagcagttcccgctcgacgaggaaaccggcttc
ttcgtcggagcgtggctcgccgaaggctcactggccgaccactacgtctcgatttcgaac
gtcgatgcggcgttccagtcccggattcggtcgtttgcagagcggttcgacctcaccgtc
aacgagtacgaaaacgatagcggcttcgcagccggatacgacatccgcctcaacgggacg
attctctcggatttcctccgagctgcgtgtacggacgacggtgaaaagagtattccaggg
tttgccatcggtgccaacgaggcgttcttgaaggggctgctccagggctacttcagcggc
gatggaaacgtcggaacgaacgccatccgctccagttcgacgagcgacaggctcaccgcc
ggcgttgggctgctgttggctcgcttcgacgtgtatgcgacgctcggccaacaggaagac
tccagaaccctccgggttccgaaaaagcacgtttcacgattcgacaatcgtatcggcatg
gtcggcgagcgcggggcagaactcgaagcgctcgctgaatcggccgacagtgacgggcct
gatgcaaccgaccagattccgaacttcggagacgccctcgaagcggtcgccgaggctgcc
gacatcccacagcggcaggtcaacagcgcaacgaagcgtcagcgaatcgatcggagtcga
ctggctcgcctcgttgcagcggcggaagcagagctcgacggggagcagtccgaactcgat
gcgctccgacaggccgttacgggcgatgtcgtctgggaccgaatcgaatccatcgagacg
gtcgaaagtgaccacgagtacgtctatgacgtctccgttgagggcctcgagacgttcacg
acggcagatggggtcgtgacgcacaacacgatgaacacgttccactacgccggtgtcgcc
gaaatcgacgtcacacaggggcttccccggctcatcgagctggtcgacgcccgcaagacg
cccgatacgccgatgatgacggtgcatctagagggcgaatacgcccgcgaccgcgagcgg
gcccacgaagttgtctggaaaatcgaggcgacgaagatactcgcgctcggtgacgtgtcg
acgaacgtcgccgacatgctcgtccagatagacctcaacgaggaaacactggccgagcgg
tggccgacgatggagagtatcgacgatatcgccggccgcatcgccggcaccatcgagggc
gaactgggcgtcgatacggcccggcccaagccgacggtcatcgagttcggccccgaagag
ccgtcctaccggcagctgctccagctcgtcgaggagcttcgggaaatcgtctttaaaggt
atcgaggagatcaaccgcgtcgtcattcggaaggaagaaaccgaacagggcgaggagttc
gtcctctacaccgaggggtcggacctgaaggaggtcctcgacatcgagggcgtcgacgcc
tcgcggacgacgtgtaacaacatccacgaaatacacaacaacctcggcatcgaggccgct
cgcgaggccatcatcgaggagacgatgaacaccctcgaagagcaggggctggacgacgtg
aacatccggcacctgatgttggtcgccgacatcatgaccaacaacggcgaaatcgaatcc
atcggccgccacggcatctccggtaacaaggattcggtgcttgcgcgtgcggcgttcgaa
gtgacggtcaaccacctcctcgatgcggccatccacggcgaggtcgacgacctcgacggc
gtgaccgagaacgtcatcgtcggcaagccgataaagctcggcaccggtgacgtcgacctg
cggatgggtgcgacccgagacagcgggtcgagggccgacgactaa

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