Entry |
|
Symbol |
rpa2
|
Name |
(GenBank) replication protein A
|
KO |
|
Organism |
nph Natronomonas pharaonis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:nph00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP_0314A (rpa2)
03420 Nucleotide excision repair
NP_0314A (rpa2)
03430 Mismatch repair
NP_0314A (rpa2)
03440 Homologous recombination
NP_0314A (rpa2)
03460 Fanconi anemia pathway
NP_0314A (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:nph03000]
NP_0314A (rpa2)
03032 DNA replication proteins [BR:nph03032]
NP_0314A (rpa2)
03400 DNA repair and recombination proteins [BR:nph03400]
NP_0314A (rpa2)
Transcription factors [BR:nph03000]
Eukaryotic type
Zinc finger
Cys2His2 others
NP_0314A (rpa2)
DNA replication proteins [BR:nph03032]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NP_0314A (rpa2)
DNA repair and recombination proteins [BR:nph03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NP_0314A (rpa2)
MMR (mismatch excision repair)
NP_0314A (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
NP_0314A (rpa2)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
159958..161361
|
AA seq |
467 aa
MGAIEDIYEDLDADVSESEFREAVEAKVEQMGGLADEETAAMLIAHDLDGGEVETIADIE
PGLEEVKFLGKVASVGELRTFERDGEDDEDGHVLNLDVADESGTVRVALWDDDAVAADEE
VEPGQVFRIKGRPKDGYSGVEVSADRIEADEEAEIEVDLDGRTTADSLSMGQSDVTLRGV
VLDTDAVRTFDRDDGSEGRVSNLTLGDETGKIRVTLWDEQADRAEALEAGQSVEIVDGYV
REREGDLELHAGSRSDIDELDESVEFVPDATDIDSIAIDETVDIAGVVRSADPKRTFDRD
DGSEGQVRNVRLQDNTGDIRVALWGEKADLDVGPGDEVFCADVEIQDGWQDDLEASAGWQ
STVVVLDDDDPDRGGDSAGLDEFSGGSAAAHDGSDGSDPAADDEAASDAGDEPETVTGTV
VQPADPVILDNGDETIHVETDAEVHLGQEVTVRGRRDGERFVAEDVF |
NT seq |
1404 nt +upstreamnt +downstreamnt
atgggcgctatcgaggacatctacgaggacctcgacgcggacgtatccgagtcggagttc
cgcgaggccgtcgaagcgaaggtcgaacagatgggcgggttggccgacgaggagacggcc
gcgatgctcatcgcacacgacctcgacggcggcgaggtcgaaaccatcgccgacatcgaa
ccggggttagaggaggtgaagttcctcggtaaggtagcaagcgtcggcgaactgcggacc
ttcgagcgagacggcgaagacgacgaggacggacacgtcctcaacctcgatgtcgccgac
gagtcggggacagtcagagtcgcactgtgggacgacgacgccgtcgcggccgacgaggag
gtcgaacccgggcaggtgttccgcatcaagggccgtccgaaagacggctacagcggtgtc
gaagtcagcgccgaccgcatcgaggccgacgaagaagccgaaatcgaagtcgacctcgac
ggacggacgacggccgactcgctttcgatggggcagtccgacgtgacgctccgcggtgtc
gttcttgataccgacgcagtccgtaccttcgaccgcgacgacggcagcgagggccgcgtc
tcgaacctgacgctcggcgacgagaccgggaaaatccgggttacgttgtgggacgaacag
gctgaccgggccgaggcgctcgaagccggccagagcgtcgaaatcgtcgacggctacgtc
cgggaacgcgagggcgacctcgaactccatgctggctccagaagcgacatcgacgagctc
gatgaatccgtcgagttcgtccccgacgcaaccgacatcgacagcatcgccatagacgag
acggtcgatatcgccggcgtcgtccgttctgcggacccgaaacggaccttcgaccgcgac
gacggcagcgaaggacaggttagaaacgtccggctgcaggacaacacgggcgacattcga
gtggcgttgtggggtgaaaaggccgaccttgatgttggccccggtgacgaggtgttctgt
gccgatgtcgaaatccaggacggctggcaggacgacctcgaagcgtccgccggctggcag
tcgacggtcgtcgtccttgacgacgatgacccggaccgtggcggtgattccgccgggctc
gacgagtttagtggtggttcggcagcggctcacgacgggagcgacggcagcgacccagca
gccgacgacgaggccgcaagcgatgcgggtgatgaaccggaaacggttactggaaccgtc
gtccagcccgcagacccggttatcctcgacaacggcgacgagacgattcacgtcgaaacg
gacgccgaagtccatctcggacaggaggtaacggtccgcggccgtcgtgacggcgagcgg
ttcgtggccgaagacgtcttctag |