Natronomonas pharaonis: NP_0444A
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Entry
NP_0444A CDS
T00279
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nph
Natronomonas pharaonis
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nph03016
]
NP_0444A (endA)
Enzymes [BR:
nph01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NP_0444A (endA)
Transfer RNA biogenesis [BR:
nph03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NP_0444A (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
CAI48313
UniProt:
Q3IU70
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All DBs
Position
complement(227029..228039)
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AA seq
336 aa
AA seq
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MEGHLSDGLVEVGPNGRERYYDSSGYGRPDGAGVRLAPVEAAYLLARGDLDAVDGMGLEA
FLADTPDLVVPFLVYRDLRERGFYVSPALEGWVADHAGIDFVVHPRGDGPWDGTVAYRVR
VVDERGSVRLDSLGDVVLAVVDEESELTYLETDRPAVDGTSGLEADLTADGVLLEDRVLC
WDAPPALYEQGFYGQRMDREDGPLQLSLLEAAHLAATGVLSVAGGAAAVEARGRDAEGER
FDRRLTVYRTLRERGVVPKTGFKFGADFRTYADVDSVSELGHSELLVRVLPADATLSPRD
VALDVRLAHGVRKRMVFALVDDGDEIRWVSVSRLTP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacctgtccgacgggctcgtcgaggtcggtccgaacggccgcgaacgttac
tatgactccagcggctacggccgccccgacggggcgggcgtccgactcgcgcccgtcgag
gccgcctacctgctcgcccgcggcgacctcgatgcggtcgacgggatggggctggaggcg
tttctggccgacacccccgaccttgtggtcccgtttctggtttaccgggacctccgagag
cgtggcttctacgtctcaccggcgctggagggctgggttgcggaccacgcgggcatcgac
ttcgtcgtccacccgcgcggtgatggcccgtgggacggaacggtcgcctaccgggtccgg
gtcgtcgacgagcgtggctccgtccggctcgactcgctcggcgatgtggtcctcgccgtt
gtcgacgaagaaagcgaactgacgtatctcgaaaccgaccgcccggcggtcgacggcacg
agcggccttgaggcggacctgaccgcagacggcgtgttgctcgaagaccgggtgctctgc
tgggatgcgccaccggcgctctacgagcagggcttctatggccagcgaatggaccgcgag
gacggcccgctccaactgtcgctgctcgaagccgcccatctcgcggcgacgggcgtcctc
tccgttgcgggcggcgctgcggctgtcgaggcccgcggacgcgacgccgagggcgaacgg
ttcgaccgacggctaaccgtctatcggacgctccgggagcgcggcgtcgtccccaagacg
gggttcaaattcggggccgacttccggacgtacgccgatgtcgacagcgtctcggagctg
ggccactccgagctgctggttcgggtgctcccggccgacgccaccctgtcgccgcgggac
gtggcgctcgatgtgcggctggcccacggcgtccgcaagcggatggtgttcgcgctcgtc
gacgacggggacgagattcggtgggtgtcggtctcccggctgaccccatag
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