Natronomonas pharaonis: NP_1010A
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Entry
NP_1010A CDS
T00279
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nph
Natronomonas pharaonis
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nph03016
]
NP_1010A (thpR)
Enzymes [BR:
nph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NP_1010A (thpR)
Transfer RNA biogenesis [BR:
nph03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NP_1010A (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Phage_P2_GpU
Motif
Other DBs
NCBI-ProteinID:
CAI48596
UniProt:
Q3ITD8
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All DBs
Position
497003..497551
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AA seq
182 aa
AA seq
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MRLFVSATVAPLSDAIADIQAPLRGLDGLRPTDPQQAHITMKFLGAGDHDTDALAAAIET
AVADADTGPFEVSLEGVGVFPSLEYISVVWLGVGGGSRELTRLHEQLEAETTALGYDAES
HEFTPHVTLARMDNAASKAEVQEFVQTADPDAGRVRLEELRLTESTLTPDGPEYETRRRF
EL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgttagcgcgaccgttgccccgctctcggatgcgattgctgacatacag
gctccactacgcggactggacgggctgcggccgactgacccacagcaggcccatatcacg
atgaagtttctcggagcgggcgaccacgatacagacgctctggctgctgccatcgaaacc
gctgttgccgatgccgacaccggcccgtttgaggtctcactggaaggcgtcggtgtcttc
ccgtcgctggagtacatcagcgtcgtctggcttggggtcggcgggggaagtcgcgagctg
acgcgacttcacgagcagttggaggccgagacgacggcgctggggtacgacgccgagtcc
cacgagtttactccacacgtcacgcttgctcggatggacaacgcggcctcgaaagccgaa
gtacaggagttcgtccagactgcggacccggatgccggtcgcgtccggctcgaagaattg
cggctcaccgagagtacgctcactccggacgggccggaatacgagacgcgacggcggttc
gagctgtag
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