Natronomonas pharaonis: NP_1222A
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Entry
NP_1222A CDS
T00279
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nph
Natronomonas pharaonis
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nph03032
]
NP_1222A (topA)
03400 DNA repair and recombination proteins [BR:
nph03400
]
NP_1222A (topA)
Enzymes [BR:
nph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NP_1222A (topA)
DNA replication proteins [BR:
nph03032
]
Prokaryotic type
DNA Topoisomerases
NP_1222A (topA)
DNA repair and recombination proteins [BR:
nph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NP_1222A (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DNA_pol_lambd_f
Cdd1
IMS_HHH_1
DUF4332
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CAI48702
UniProt:
A0A1U7EUR4
LinkDB
All DBs
Position
599309..601807
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AA seq
832 aa
AA seq
DB search
MELIVTEKDNAARRIAEILSDGSASTERRNGVNVYRWGDKRCVGLSGHVVGVDFPPEYED
WRDVQPVELVEADVVKKPTQENIVRTLKQLAGEADRATIATDYDREGELIGKEAYELIRE
EADIPIQRVRFSSITENEVKEAFATPDDLDFDLAAAGEARQIVDLLWGAALTRFLSLSAN
QLGDDFISVGRVQSPTLKLIVDREREIEAFDPDDYWELFADLAREGTTFEAQYFYREDGT
EQERVWDESGAETAFETLRNAGTAVVESVRRRRRTDEPPEPFNTTQYISAANGIGLSAQR
AMSVAEELYTAGYITYPRTDNTVYPDDLDPEALLSAFTDHYLFADDAEMLRSADDIEPTA
GDEETTDHPPIHPTGEIPNKDDLSDDEWEVYELVVRHFFATVADAAEWEHLKVVADADGC
SLKANGKRLVEPGYHEVYPYRSTSENHVPAVEEGEQLAIEDARIEEKQTQPPRRRGQSRL
IEELESRGLGTKSTRHNTLQKLYDRGYIESDPPRPTKLAMAVVEAAEQFADRIVDEEMTA
QLESDMQAIVDGEKDLEAVTEESRALLGRIFDELHDSREEIGEHLQESMKADRMLGPCPE
CGEDLLIRRSRKGSYFVGCDGFPDCRYTLPLPSQGEPTVIDEACTEHDLNHVKMLAGRST
FVHGCPQCKADEADETDDRIIGDCPDCGDNADGELAIKQLRSGSRLVGCTRYPECEYSLP
LPRRGDIEVLDERCADHDLPHLRVVDNGDDPWELGCPICNYTEYREQQAASAIEDLDGVG
QKTAEKLADAGIESLSDLRGADAEAVANEVQGVSEDRLREWQAEANVSASAD
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
gtggagctcatcgtcaccgaaaaggacaacgctgcccgtcgtatcgcagaaatcctctcc
gacggcagcgcgtctacggagcgacggaacggcgtcaacgtctaccggtggggcgacaag
cgctgtgtcggcctctccggccacgtcgtcggcgtcgacttcccgccggagtacgaagac
tggcgcgacgtccagcccgtcgaactggtcgaggccgacgtcgtcaagaaaccgacacag
gagaacatcgtccggacgctcaagcaactcgccggcgaagccgaccgggcgaccatcgcg
accgactacgaccgcgagggcgaactcatcggcaaggaggcctacgaactcatccgcgag
gaagccgatattccgatacagcgggttcggttctcctcgattacggaaaacgaggtcaaa
gaggccttcgcaacccctgatgacctcgatttcgacctcgcggccgccggcgaggccaga
cagattgtcgacctgctgtggggcgctgcgctgacgcgctttctgtcgctttcggcgaac
caactcggcgatgatttcatctccgtcggccgggtccagtcgccgacgctgaagctcatc
gtcgaccgcgaacgcgaaatcgaggccttcgaccccgacgactactgggagctctttgcc
gacctcgcccgcgaggggacgacctttgaggcccagtatttctaccgcgaggacggcacc
gaacaggagcgcgtctgggatgaatccggggccgaaaccgccttcgagacgctccggaat
gccggcacggcggtggtcgagtcagtccgccgccgccggcggaccgacgagccgccggag
ccgttcaacaccacccagtatatcagcgccgccaacggcatcgggctgtcggcccagcgg
gcgatgagcgtcgccgaagaactctacaccgctggttacatcacctatccccggactgac
aacaccgtctatccggacgacctcgaccccgaggcgctgctgtcggcgtttaccgaccac
tatctctttgccgacgacgccgagatgttgcgctcggcagatgacatcgagccgacggcg
ggcgacgaagagacgaccgaccacccgcccatccacccaaccggcgagatccccaacaag
gacgacctctcggacgacgaatgggaggtctacgaactggtcgttcggcatttctttgcg
accgttgccgacgccgccgagtgggaacatctgaaggtcgtcgccgacgccgacggctgt
tcgctgaaggcaaacggcaagcggctcgtcgaaccggggtatcacgaggtgtacccgtac
cgctcgacctcggaaaaccacgtcccggctgtcgaggagggcgaacagcttgccatcgag
gacgcccgcatcgaggaaaagcaaacccaacctcctcgccgtcgcggccagtcgcgactc
atcgaggaactcgaatcccgcgggctcggtaccaaatcgacccggcacaacacgctccag
aagctctacgaccgcggctacatcgagagcgacccgccgcgaccgacaaagctcgcaatg
gctgtcgtcgaggccgcagagcagttcgccgaccgcatcgtcgacgaggagatgaccgca
cagcttgagtcggacatgcaggccatcgtcgatggcgaaaaggacctcgaagcggtgacc
gaagaatcccgtgcgctactcggccgcatcttcgatgagctccacgactcccgggaggaa
atcggcgagcaccttcaagaatcgatgaaggccgaccggatgctcggtccctgcccggag
tgtggcgaggacctcctgatacggcgctcgcgaaaagggtcgtacttcgtcggctgcgat
gggtttccggactgccggtatacgctcccgctgccgagccaaggcgagccgacggtcatc
gacgaggcgtgtacagaacacgacctcaaccacgtgaagatgctcgccggccggagcacg
ttcgtccatggctgcccgcagtgtaaggccgacgaggccgacgagacggacgaccgtatc
atcggcgactgtcccgactgcggcgacaacgcggacggtgagttggctatcaaacaactc
cgcagcggctcgcggctcgtcggctgtactcgctatccggagtgtgagtactcgctgccg
ctgccgcgtcgcggtgacatcgaagtgctggacgaacgctgtgcggaccacgacctgccg
catctccgtgtcgtcgacaacggcgacgacccgtgggagcttggctgtcccatctgcaac
tacacggagtatcgcgaacagcaggccgcctcggccatcgaagacctcgacggcgtcggc
caaaagaccgccgagaagctcgccgacgccggcatcgagtcgctgtccgacctccgtggt
gccgacgccgaggccgtcgccaacgaggtacagggtgtctcagaagaccggctccgggag
tggcaagcagaggccaacgttagcgctagcgccgactaa
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