Natronomonas pharaonis: NP_1306A
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Entry
NP_1306A CDS
T00279
Symbol
rad3b
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nph
Natronomonas pharaonis
Pathway
nph03022
Basal transcription factors
nph03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NP_1306A (rad3b)
09124 Replication and repair
03420 Nucleotide excision repair
NP_1306A (rad3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_1306A (rad3b)
03400 DNA repair and recombination proteins [BR:
nph03400
]
NP_1306A (rad3b)
Enzymes [BR:
nph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NP_1306A (rad3b)
Transcription machinery [BR:
nph03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NP_1306A (rad3b)
DNA repair and recombination proteins [BR:
nph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NP_1306A (rad3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_34
nSTAND3
ATPase
Lipase3_N
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
CAI48744
UniProt:
A0A1U7EUT6
LinkDB
All DBs
Position
complement(636192..638360)
Genome browser
AA seq
722 aa
AA seq
DB search
MSRSDGSRQFFPYDQPYDHQSDAMERIREALVEERDVLFEGACGTGKTLAALVPALEYAR
AAGKTVVITTNVHQQTRQFIEEARAINEQTPIRSVVFRGKASMCHIDVGYEECQALRDTT
RELVETEQDIAELEARESELRDASKAGDGDAAEARGTVLDELDELEASAEALREERNVCD
RYYKNLTGETDEFYQWLYEDVRTPEEIYEYADRQGLCGYELLKDGIEGIDLVICNYHHLL
DPMIREQFFRWLGRDPEDVIAVFDEAHNVADAARDHARRTLAERTLDGALDELEDVSDAR
ADAAANVVGAFKDALVETYESSFGYGDREAVGEEWEDVPVDSESGRDDLSVAFLEAYTGQ
GFETDLESALSLGEELDRRYEQEYKDGETTTRKECPTLTAAAFIETWMDASVEPGEYPVV
GVRRSETGIVGRAELYTCLPRRVTEPLFEELHGTVLMSATLRPFDVTEDVLGLEEPLTMA
YGEQFPDERRRTYAVETPALFASKRDDPQVQETVGNVIAETVAFTPGNTLAFFPSYAEAE
RYYHRYAGEATPYLDEPGVEAESLRQSFIEDDQAVLFTSLWGTLAEGVSFDGDDARSVLV
VGVPYPHLDERMEAVQGAYDGAFGDGTDDAGWRYAVEIPTVRKTRQALGRVVRSPTDFGV
RVLVDERYTQSKRADLGEYSVYPEFPPEERNEHIDIGPEKLKFAMLNFYSDMDAWDGDPP
TP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacggtcggacggcagccggcagtttttcccctacgaccagccgtacgaccaccag
tcggacgcgatggagcggatacgcgaagcgctcgtcgaagagcgcgacgtgcttttcgag
ggcgcttgcgggaccggcaagacactcgcggcgctcgtcccggcgctagagtatgcccgt
gcggccggcaagaccgtcgtcatcacgacgaacgtccaccagcagacgcgacagttcatc
gaggaggcgcgggcgataaacgagcagacgccgatacggagtgttgtcttccggggaaaa
gcctcgatgtgccacatcgatgtcggctacgaggagtgtcaggcgcttcgcgacaccacg
cgcgaactcgtcgagaccgaacaggacatcgccgaactcgaagcacgggaaagcgaactg
cgcgatgcgagcaaagcgggagacggggacgcagccgaagctagggggaccgtcctcgac
gaactcgatgagttggaggcaagcgccgaggcgctccgcgaggagcgaaacgtctgtgac
cgctattataagaatctcaccggcgaaaccgacgagttctaccagtggctctacgaggac
gttcgcacgccagaggagatatacgagtacgccgacagacagggtctttgcggctacgag
ctcctgaaggacggcatcgagggtatcgacctcgtcatctgtaactaccaccacctgctc
gatccgatgatacgcgagcagttcttccggtggctcggccgggaccccgaagacgtcatc
gccgtctttgacgaggcacacaacgtcgccgacgccgccagagaccacgcccggcggacg
ctcgccgagcggacactcgatggtgcgctcgacgagcttgaggacgtaagcgacgcccgt
gccgacgccgcagccaacgtcgtcggcgcgttcaaggacgcgctcgtcgagacgtacgag
tcgtcgttcggctacggcgaccgggaggctgtcggcgaagagtgggaggacgtaccggtc
gacagcgaatcggggcgtgacgacctttccgtggcgtttctggaagcctacaccggacaa
gggttcgaaacggacctcgaatcggcgctgtcgctcggcgaggagctcgaccggcgctac
gaacaggagtacaaggacggcgagacaacgacgagaaaggagtgtccaacgctcaccgcg
gcagcgttcatcgagacgtggatggacgcaagcgtcgagccgggggagtacccagtcgtc
ggggtgcgccgctcagagacaggtatcgtcggacgggctgagctgtacacctgtctgccg
cgccgggtcacggaaccgctgttcgaagaactacacggaaccgtgctgatgagtgcgacg
ctccgccccttcgatgttaccgaggacgttctcggccttgaggagccgctgacgatggct
tacggcgagcagttccccgacgagcggcggcgaacctatgctgtcgagacgccggcgctg
ttcgccagcaagcgtgacgacccgcaggtacaggaaacggtcggaaacgtcatcgcggag
accgtcgctttcacaccggggaacacgctcgctttcttcccgagttacgcggaggccgag
cggtattaccatcggtatgccggcgaagcgacgccgtatctcgacgaaccgggcgtcgag
gccgagtcgctacgccagtcgtttatcgaggacgaccaagcagtgctttttacctcgctg
tgggggacgctggcagagggcgtcagtttcgacggcgacgacgcccggagcgtcctcgtg
gtcggcgtcccgtatccgcatctcgacgagcggatggaagccgttcagggtgcttacgac
ggggcgttcggcgacggaaccgacgacgctggctggcggtacgccgtcgagattccgacg
gttcgaaaaacacggcaggcactcggtcgcgtcgtccggtcgccgacggatttcggtgtc
cgggtgttagtcgacgagcggtacacacaatcgaaacgcgccgacctcggcgagtacagc
gtctatccggagtttccgccggaagaacggaacgaacacatcgatatcggccccgagaaa
ctgaagttcgcgatgttgaacttttactcggatatggacgcctgggatggcgacccacca
acaccctga
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integrated database retrieval system
