Natronomonas pharaonis: NP_1508A
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Entry
NP_1508A CDS
T00279
Symbol
polB
Name
(GenBank) DNA-directed DNA polymerase B (intein-containing)
KO
K02319
DNA polymerase, archaea type [EC:
2.7.7.7
]
Organism
nph
Natronomonas pharaonis
Pathway
nph03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP_1508A (polB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nph03032
]
NP_1508A (polB)
Enzymes [BR:
nph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP_1508A (polB)
DNA replication proteins [BR:
nph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
B-family DNA polymerases
NP_1508A (polB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
Hint_2
Hint
LAGLIDADG_3
PT-HINT
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
CAI48845
UniProt:
A0A1U7EV21
LinkDB
All DBs
Position
complement(732514..737736)
Genome browser
AA seq
1740 aa
AA seq
DB search
MEQGTLGDFDTGASDDADAGRPAAEAAAVAGSDDGDASVVDVADYEFPDADGQIECAVTQ
VDYTVEGGGDDEHPVLHVFGRRPNDGDDEPLHIRVYGFKPYFYTPLSELDIADSAEAPLT
EADIVDSRLDHDRLTGVETEADDGDGPNELVVYESIRGEKLVKVFGQTPRDVGQLRDRFE
HYEADILFPNRLLIDKDITSGVRAPNRELDDGSLKVHHSELTATAVDAESRLHILDIEVD
DRHGFPEDGEEEIVCLTSYDSYRDEYVIWLSESDDGVGGPEALGGYDPIGDGPLDVDVRR
FDEEATMLVDYLDYIEDTDPDVLSGWNFDDFDAPYLIDRIDRIASRHDRLYSDRLSRVRE
VWDSGWGGPNIKGRVVFDLLYAYQRTQFSELDSYRLDAVGEEELGVGKERYPGDIGDLWE
DDPERLLEYNLRDVELCVELNRKQNIVEFWEEVASFVGCKLEDATTPGDAVDMYVLHKIH
GEFALPSKGHQEGEEYEGGAVFDPISGVKEMVSVLDLKCFSGDTDVATPDGIKNIQEVAV
GDPVYTLNPETFECEIKPVVDTQSYRNKYGELHHVAGRTHDFKVTENHRFLLSETVDLDS
PGPDDYALSEYRELPEYERLAFPNHEPMAGATREEFDLAGAVDDGHAVVCAHDGRSAFRT
AMPAGVEAALDRADGTSQLAATEEKTGTYRIPIDTYRERRDVIDEHADEVLLKYEREDNQ
IPTGFGMDDWLELVGWFVTAGRFAHEAKRIVLRRQDEEGRSAIRSLLERMELPYDADGTR
VTVSNRVLYDWFVKNCGDGATETRLPEWVFELDAAHLRTLLETLVDGDGSRTDSGLGEFW
TQSDRLKDDVVRLAVRCGEKPTVSENQDGTWYVSVGTRGSMKKSNATVEDHDGDVHCITA
EDNHVVLAGRNGHLQWVGQSLYPMCMVTINASPETKVDPDNYGAETYAAPNGTHFRKEPD
GVIREMVDELLEEREEKKSLRNEHEPSTDAYETYDRQQSAVKVIMNCFTPDTEVLTPDGV
RNIRALDIGDEVYSLDPETMEMEVKPVVDTHAYPDYRGELVDIQTGEIDFRVTPNHRMLV
RKNGTNGITDDEYRFVEAGALDLATTYELPHDWAGPDGEDVTQIDLTELIDEEYEVWVRP
EVHGRTFTAELGWKPRRVPKADIDTVGYVFTADEFKQHREYIESVCEQSYIRRESGLKWI
PRVYDGDDFLELLAWYVTEGNAHTSERKEFDGQRHGSSTVQIAQEPVVADGGDTHATIGT
LLDRMGFDYDNDNGSYQVTSKLLGDLFCTLGGGGSEDKRIPQLVFEASRRQKERFMQTLI
SGDGDRQPNSWQYNTASERLRDDVLRLCAHLGVPASYSEESGVYRIYVTEDGTNTLRMDR
SAERTTADDGVYCVTVEDNHTLLAGRAGKFQFVGQSLYGVLGWDRFRLYDKEMGAAVTAT
GRDVIEFTEQAAAELDKDVIYGDTDSVMLELGNEVSEDEAIEQSFEIESHINDAYDRFAE
RLNAEEHRFQIEFEKLYRRFFQAGKKKRYAGHIIWKEGKEVDDLDITGFEYQRSDIAPIT
KEVQREVLEMIVTGEDPEDIKSYVHDVIERVREGDISHEELAIPGGIGKKLDNYETDTAQ
VRGAKYANRLLGTNFTSGSKPKRLYLAKVHPSFFRKMESEEGLDPSTDQLYGEFKREAES
GEAVICFEYEDQIPDAFEVDYEKMLDKTLKGPIARVLEALDISWDEVESGQEQTGLGSFM
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggtacgctcggggacttcgatacgggcgcgtcagacgatgccgacgccggc
cggccggccgccgaggcagcggcggtcgccggcagcgacgacggggacgcgtcggtcgtc
gatgtcgccgactacgagttccccgacgcggacggacaaatcgagtgtgcggtcacgcag
gtcgactacaccgtcgagggaggcggcgacgacgagcatccggtgttacacgttttcggc
cgccggccgaatgacggcgatgacgagccactccacatccgtgtctacggatttaaaccg
tacttttatacgccgctttcggagcttgatatcgctgacagcgccgaagcacccctcact
gaggccgacatcgtcgattcgcggctggaccacgaccggctgactggcgttgaaacggaa
gccgacgatggtgacggcccgaatgaactggtcgtctacgagtcaatccgcggcgagaag
ttggtaaaggtcttcggccagacgccgcgcgatgtcgggcagctacgggaccgcttcgag
cactacgaggcagatatcctctttcccaaccggctgctcatcgacaaggacatcacgagc
ggtgtccgtgccccgaaccgcgagctcgacgacggaagcctgaaagtccaccacagcgag
ctgacagcgacggccgtcgacgccgaaagccgcctccacatcctcgacatcgaggtcgac
gaccgacacgggttccccgaagacggcgaggaggaaatcgtctgtctgacgagctacgac
tcctaccgcgacgaatacgtcatctggctctcggagtccgacgacggcgtcggcgggccc
gaagccctcggcggatacgaccccatcggcgacggtccactcgatgtcgatgtccgccgc
ttcgacgaggaggcgacgatgctcgtcgactacctcgattacatcgaggataccgacccg
gacgttctcagcggctggaacttcgatgacttcgacgccccctacctcatcgaccgcatc
gaccgcatcgcaagccgccacgaccgactctactccgaccggctttcgcgggtccgcgag
gtctgggactccggctggggcggccccaacatcaagggacgggtcgtcttcgacctgctg
tatgcctatcagcggacgcagttctccgaactcgactcctaccggctcgatgccgtcggc
gaagaggaactcggcgtcggcaaggagcgctatccgggcgacatcggcgacctctgggag
gacgaccccgagcgactgctggagtataacctccgtgacgtcgagctctgtgtcgagcta
aaccgcaaacagaatatcgtcgagttctgggaggaggtcgcctccttcgtcggctgtaag
ctcgaagacgcaacgacgcccggcgacgccgtcgacatgtatgtcctccacaagattcac
ggcgagttcgcgctgccgtcgaaggggcaccaagagggtgaagaatacgagggaggggcc
gtctttgacccgatttccggtgtcaaagagatggtctcggtgctggacctgaaatgcttc
agcggggatacggacgtggcgacaccggacgggatcaagaacattcaggaggtagcggtc
ggtgacccggtgtacaccttgaaccccgagacattcgaatgtgagataaagccggtcgtc
gacacgcagtcctaccggaacaagtacggtgaactccatcacgtcgccgggaggacgcac
gatttcaaggtgaccgagaaccatcggttcctgctttcagagacggtggacttggacagc
cccggtcccgacgactatgcactctccgagtatcgagagctaccggagtacgagcggctc
gcgtttccgaaccacgagccgatggcaggcgcaacgcgggaggagttcgacctcgccgga
gcagtcgacgacggacacgccgtcgtttgcgcccacgatggccgcagcgcgtttcgcaca
gcgatgccggcgggcgttgaagccgctctcgaccgggcggacggcacctcccaactggcc
gcaacggaagaaaagaccggcacgtatcgcatccccattgacacgtaccgcgagcggcgg
gacgtaatcgacgagcacgccgacgaggtgttgctcaaatacgagcgcgaggacaaccaa
attccgacagggttcgggatggacgactggcttgagctagtcggctggttcgtcactgcg
ggacggttcgcccacgaggcaaaaagaatcgttctccgtcgacaggacgaggagggtcgt
tccgcgatacggagcctcctcgaacggatggaactgccctacgacgccgatggaacccgg
gttactgtctcaaatcgggtcctgtacgattggttcgtcaaaaactgcggtgacggcgcg
accgaaacgcggctcccggagtgggtgttcgaactcgacgccgcccacctccgaacgctc
cttgagacgctcgtcgacggcgacggcagccgtaccgacagcgggctcggagagttctgg
acacagagcgaccggctgaaggacgacgttgttcggcttgcggtgcgctgcggcgagaag
ccgactgtctcggagaaccaagacggtacgtggtacgtctcagtcggcacacgtgggtcg
atgaaaaagtccaacgcaacggttgaagaccacgacggggacgtccactgtatcaccgcc
gaggacaatcacgtcgtactcgcgggccgtaacggccatctccagtgggtcggccagtcg
ctctaccccatgtgcatggtgacgattaacgcgtctcccgagacgaaggtcgaccccgac
aactacggggccgaaacctacgccgctcccaatggcacgcacttccggaaggaaccggac
ggggtaatccgggagatggtcgacgagttgctcgaagaacgggaggaaaaaaagagcctc
cgaaacgaacacgagccaagcaccgacgcctacgagacgtatgaccgacagcagtcagct
gtcaaggtcattatgaactgctttacgccggacacggaggtcctgacacccgacggcgtc
cggaatatccgtgccctcgacatcggcgatgaggtctactcactagacccagagacgatg
gaaatggaggtcaagcccgtggtcgacacgcacgcctacccggactaccgcggagaactc
gtagacatccagacgggggaaatcgacttccgcgtgacaccgaaccatcgaatgctcgtc
cgaaaaaacgggacgaacggcatcaccgacgacgaatatcggttcgtcgaggccggtgcc
ctcgacctggcgacaacctacgagctgccgcatgactgggctggtccggacggtgaagac
gttacgcaaatagacctgacagaactcatcgacgaggagtacgaggtgtgggtacggcct
gaggtccacggtcggacgtttaccgccgagttagggtggaagccccggcgagtgccgaaa
gccgacatcgataccgtcggatacgtgttcaccgctgatgagttcaaacagcaccgtgag
tacatcgaatccgtctgcgagcaaagctacatccgccgcgagtccgggctgaaatggatt
cctcgcgtgtacgatggggatgacttcctcgagttgctggcgtggtatgtgaccgaaggc
aacgcccacacatcggaacgaaaggagttcgacggacagcgccacgggagttcgacggtt
cagatagcacaggagccggtcgtagccgatggaggagacacacacgcgaccattggcacg
ctcctcgaccggatggggttcgactacgacaacgacaacgggagctatcaggtcacctcg
aagctcctcggtgacctgttctgtacccttggcggagggggaagtgaggacaagcgtatt
ccgcagctcgtttttgaagcatctcgccgacagaaagagcggttcatgcagacactcatc
agcggtgacggggaccgccagccgaattcgtggcagtataacaccgcaagcgagcggctc
cgggacgacgtgttgcggctctgtgcgcatctcggcgtacccgcaagctacagcgaagaa
agcggcgtctatcgcatctacgtcacggaagacggcacgaacacgctccgcatggaccgg
agcgcagagcgaacaactgctgatgacggcgtgtactgcgtaaccgtcgaagacaaccat
acactccttgcaggccgagcggggaaattccaatttgtcggccaatccctctacggcgtt
ttgggatgggaccgcttccggctctacgacaaggagatgggcgctgccgtgaccgcgacc
ggccgggacgtcatcgagttcaccgagcaggcagccgcagagctcgataaggatgtcatc
tacggcgacacggactcggtaatgctggaactcggcaacgaggtttctgaggacgaagcc
atcgagcagtcgttcgaaatcgagtcgcacatcaacgacgcctacgaccgattcgcagag
cgactcaacgccgaagaacaccggttccaaatagagttcgaaaagctctatcggcggttc
ttccaggccggcaagaaaaagcgatacgccggccacatcatctggaaggagggcaaagag
gtcgacgacctcgacatcaccggcttcgagtaccagcggtcggacatcgcgccgattacc
aaggaggtccagcgggaagtcctcgagatgattgtgaccggcgaagaccctgaagacatc
aagagctacgtccacgatgtcatcgagcgggtccgggaaggcgacataagccacgaggag
ttagccatcccggggggtatcggcaagaaactcgacaactacgagaccgacaccgcacag
gtccggggcgcaaagtacgcaaaccggctgctcgggacgaacttcacgagcgggtcgaag
ccgaagcggctctatttagcgaaggtccatccgtcattcttccggaagatggagtccgag
gaagggctggacccctcgacggaccagctttatggcgaattcaagcgagaggccgaaagc
ggcgaggcagtcatctgcttcgagtatgaagaccagattcccgatgccttcgaggtcgac
tacgagaagatgctcgataagacgttgaaaggccctatcgctcgggttctggaagcgctg
gacatctcgtgggacgaggtcgagagcggacaggaacagaccgggctcggaagcttcatg
tga
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