Natronomonas pharaonis: NP_1684A
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Entry
NP_1684A CDS
T00279
Symbol
tfbA1
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nph
Natronomonas pharaonis
Pathway
nph03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NP_1684A (tfbA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_1684A (tfbA1)
Transcription machinery [BR:
nph03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NP_1684A (tfbA1)
Prokaryotic type
Archaeal type
TFB
NP_1684A (tfbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
eIF-6
Zn_Ribbon_YjdM
DUF7573
GATA
Motif
Other DBs
NCBI-ProteinID:
CAI48933
UniProt:
A0A1U7EVA0
LinkDB
All DBs
Position
811856..812824
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AA seq
322 aa
AA seq
DB search
MPGPTRQRERATEGEAEAETEAEQETGCPECDSDSLVRSGDGGGELVCEDCGLVIEEENI
DRGPEWRAFNHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGRSISSEKRSQMHRL
RKWQERIRTKDAGERNLQFALSEIDRMSSALGVPRSVREVASVIYRRALDDDLIRGRSIE
GVATAALYAACRQEGIPRSLDEVADVARVEQKEIGRTYRYIAQELSLGLEPVDPVQYVPR
FCSELGLSEEVEQKTREIIEVTAEKGMLSGKSPTGYAAAAIYAASLLCNEKKTQREVAEV
AQVTEVTIRNRYQEQIEALGIH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccagggcccacccgacagcgagaacgcgctaccgaaggcgaggcggaggcggagaca
gaggcggagcaggaaactggttgtcccgaatgcgattccgattctctggtgcggagcggg
gacgggggcggtgaactcgtctgtgaggactgcgggctggttattgaggaagaaaacatc
gaccgtggtccggagtggcgtgcgttcaaccactccgagcggcagtcgaaatcgcgtgtt
ggggcgccgacgacccagacgatgcacgacaaggggctgacgacccagatcgactggaag
gacaaagacgcctacgggcggtcgatttcgtcggagaagcgctcccagatgcaccgactg
cggaagtggcaagagcggattcggaccaaggacgcgggcgagcggaacctgcagttcgcg
ctgtcggaaatcgaccgaatgtcgtcggcactcggcgtgccgcggtcggtacgggaggtt
gcgtcggtcatctatcgacgcgcgctcgacgacgacctgattcgtgggcggtctatcgag
ggcgtcgctaccgctgccctctatgctgcctgccgtcaggaggggattccacggtcgctt
gatgaggtcgctgatgtcgcccgcgtcgagcagaaggaaattggccggacctaccgatat
atcgcacaggaactctcgctcggactcgagcccgtcgaccccgttcagtacgtcccgcgc
ttttgctccgagctcggtctcagcgaggaggtcgaacagaagacacgcgagataatcgaa
gtaaccgccgagaagggaatgctttcgggcaagtcgccgacgggctacgccgccgcggct
atctatgcggcgtcgctgctgtgcaatgaaaagaagacgcagcgcgaggtcgccgaagtc
gcacaggtgactgaggtcaccatccgcaaccgctaccaagaacagatcgaagcgctcggt
atccactga
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