Natronomonas pharaonis: NP_3072A
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Entry
NP_3072A CDS
T00279
Symbol
cdc48a
Name
(GenBank) AAA-type ATPase (CDC48 subfamily)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nph
Natronomonas pharaonis
Pathway
nph04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NP_3072A (cdc48a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nph03019
]
NP_3072A (cdc48a)
03009 Ribosome biogenesis [BR:
nph03009
]
NP_3072A (cdc48a)
04131 Membrane trafficking [BR:
nph04131
]
NP_3072A (cdc48a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nph04147
]
NP_3072A (cdc48a)
Messenger RNA biogenesis [BR:
nph03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NP_3072A (cdc48a)
Ribosome biogenesis [BR:
nph03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NP_3072A (cdc48a)
Membrane trafficking [BR:
nph04131
]
SNARE
SNARE associated proteins
Others
NP_3072A (cdc48a)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NP_3072A (cdc48a)
Exosome [BR:
nph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NP_3072A (cdc48a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
RNA_helicase
AAA_28
IstB_IS21
AAA_7
Mg_chelatase
AAA_lid_PRS2_C
ABC_tran
AAA_18
AAA_17
NB-ARC
Sigma54_activat
DUF815
TsaE
AAA_3
ATPase
Parvo_NS1
AAA_30
nSTAND_NTPase5
AAA_11
AAA_24
PhoH
SLFN-g3_helicase
NACHT
IPT
Vps4_C
DUF2480
Motif
Other DBs
NCBI-ProteinID:
CAI49627
UniProt:
A0A1U7EWY7
LinkDB
All DBs
Position
1474921..1477143
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKADATKADKLVLAPPEDASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETDPDGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDET
GRKEILQIHTRGMPLADDVDLDKMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRQDFRGALNEVDPSAMREVLVELPKVSWDDVGGLTEAKEQVQESVEW
PMNAGEKFSRMGIEPPSGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTIIFFDELDSLAPGRGGEVGSNVSERVVNQLLTELDGLEEMDDV
MVIGATNRPDMIDPALIRSGRFDRLVMVGEPDLDGREKILRIHTGDTPLAPDVSLRELAE
MTDGYVGSDLESITREAAIEALREDDDAEAVEMRHFREAVESVRPTITDDIRNYYEQIEE
EFRGGTPDGRRQSGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggtccaactcgaagtcgcaaaagcgtacccgaacgattcgggacggggcatc
gcccgcctcgaccccgatacgcttttgcatctcaaactgtcgcccggggatatcatcgaa
atcgagggcgcggagacgaccgcggcgaaggtctggcgggctgaccggcaggactggaac
accgacacggtccgcattgacggcttcacccgtcagaacgccgatgtcggtatcggcgag
cgggtgacgattcggaaggccgatgcgaccaaggccgacaagctcgtgctcgcgccgccg
gaggacgcctccgtccagttcggcagcgacgctgccgggatggtcaaacggcagattctc
aagcggccggtcgtcgaacgcgacatcgtgcccgtgatgagttcgaccaaccacccgttc
atgcggtcgccggggcaggcgattccgctcatcgccgtcgaaaccgaccccgacggcgtc
tgcctcatcaccgaagacaccgaggtcgaactccgcgaggagccgatttccggcttcgaa
aagaccggcggtggcatcacctacgaggacatcggcggcctgcaaaacgagattcagcgc
gtccgcgagatggtcgagctgccgatgaagcacccccagatattcaagaagctcggcatc
gagccgccgcagggggtgctgttgcacggcccgcccggaaccgggaagacgctgctggcg
aaggccgtcgccaacgaaacctcggccagcttcttctcgattgccggcccagagattatc
tcgaagtactacggcgaatccgaacagcagctccgggagatattcgaggacgctaccgag
gagtcgccgtctatcatcttcatcgacgaactcgactccatcgcccccaaacgggaggac
gtcaccggcgaggtcgaacgtcgtgttgtcgcccaactgctgacgatgatggacggcctc
gaatcccgcgggcaggtcatcgtcatcgcggcgacgaaccgcgtcgactccgtcgacccg
gcgctccgtcgccccgggcgcttcgaccgtgaaatcgaaatcggcgtccccgacgagacc
ggccggaaggagattctccagattcacacccgtgggatgccgcttgccgacgacgtcgac
ctcgacaagatggccgacgaaacccacggcttcgtcggcgcggacatcgagagcctgacg
aaggaggccgcgatgaaggcgctccggcggtacctcccggaaatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccggatgataatcaagcgccaggacttccgcggcgcg
ctcaacgaggtcgacccctccgcgatgcgggaggtgctggtcgagctgccgaaagtctct
tgggacgacgtgggtggcctgacagaagccaaagagcaggtccaagagtccgtcgaatgg
ccgatgaacgccggcgagaagttctcgcggatgggcatcgagccgccgtcgggggtgctg
ttgtacggcccacccggcaccgggaagaccctgatggcgaaggccgtcgccaacgagacg
aacgccaacttcatctcggttcgggggccacagctgctctcgaagtgggtcggcgaaagc
gaaaaggccatccgccagaccttccggaaggcccggcaggtctcgccgacgattatcttc
ttcgacgaactggactcgcttgcgcccggtcggggcggcgaggtcggctcgaacgtctcc
gagcgcgtggtcaaccaactgttgaccgaactcgacggcctcgaagagatggacgacgtg
atggtcatcggcgcgacgaaccgaccggacatgatagacccggcgctcatccgtagcggc
cgcttcgaccgcctcgtgatggtcggcgagccggacctcgacggccgggagaaaatcctc
cgcatccacaccggtgatacgccgcttgcgccggatgtgagcctccgggagctggccgaa
atgaccgacggctacgtcggctccgacctggagtcgattacccgcgaggccgctatcgag
gcgctccgcgaagacgacgacgccgaagcagtcgagatgcgtcacttccgggaggcggtc
gagtcggtccgaccgacaatcaccgacgacatccgcaactactacgagcaaatcgaagag
gagttccgcggcggcacccccgacggcagacgccagagcggcggccgaatcggcttccag
taa
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integrated database retrieval system
