Natronomonas pharaonis: NP_3784A
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Entry
NP_3784A CDS
T00279
Symbol
fen1
Name
(GenBank) flap endonuclease Fen1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nph
Natronomonas pharaonis
Pathway
nph03030
DNA replication
nph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP_3784A (fen1)
03410 Base excision repair
NP_3784A (fen1)
03450 Non-homologous end-joining
NP_3784A (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nph03032
]
NP_3784A (fen1)
03400 DNA repair and recombination proteins [BR:
nph03400
]
NP_3784A (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nph04147
]
NP_3784A (fen1)
DNA replication proteins [BR:
nph03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NP_3784A (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NP_3784A (fen1)
DNA repair and recombination proteins [BR:
nph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NP_3784A (fen1)
Exosome [BR:
nph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NP_3784A (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DsrE
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAI49983
UniProt:
Q3IPG8
LinkDB
All DBs
Position
complement(1824787..1825773)
Genome browser
AA seq
328 aa
AA seq
DB search
MGNADLRTLAAIEPKPFDELGGSVVAVDAHNWLYRYLTTTVKFTRSEAYTTADGEEVANL
IGVVQGLPKFFEHDVTPVFVFDGGVSDLKADEVEKRRDQRERYEAQLEAAKERDETDAAE
IAALESRTQRLTDTIVETTRELLARLDVPVVEAPAEGEAQAAHMARRGDADYVGSEDYDA
LLLGAPYTLRGLTSNGDPECMDFEATLSTHDLSWEGLVDAAILMGTDFNEGLSGVGPKTA
VKLIHEHGDLRSVLAARDDDIPHADRIRELFLDPAVTDDYDYDTDIDPDFERAREFVTET
WGVPADEVERGFERIEESVIQTGLDRWT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggacctccggacgctggcggccatcgagcccaagccgttcgacgaactc
ggcgggtcggtcgtggctgtcgacgcccacaactggctgtatcggtacctgacgaccacc
gtcaagttcacccggagcgaggcgtacacgaccgccgacggcgaggaggtcgccaacctc
atcggcgtcgtccaggggctgcccaagttcttcgaacacgacgtgacgccggtgttcgtc
ttcgacggtggtgtctccgacctgaaagccgacgaggtcgaaaagcgacgcgaccagcgc
gaacgctacgaggcacagctcgaagccgcaaaggaacgcgacgagaccgacgccgccgaa
atcgccgccctcgagtctcggacccagcggctcacggacacgattgtagagacaacccgc
gagctccttgcacggctcgacgtgccggtcgtcgaagcgcccgctgaaggggaggcacag
gctgctcacatggctcgacgcggcgacgccgactacgtcggctcggaggactacgacgcg
ctcttgcttggcgctccgtacacgctgcgggggctgacgagcaacggcgaccccgagtgc
atggatttcgaggcgacgctttcgacccacgacctgagttgggagggcctcgttgacgcc
gccatcctgatggggaccgatttcaacgagggactctccggcgttggaccgaaaaccgcc
gtgaaactgattcatgaacacggcgaccttcggagcgtgttggcggcccgcgacgacgac
atcccccacgccgaccgcatccgcgagctgtttctcgaccccgcggtcacagacgactac
gactacgatacggacatcgacccggacttcgagcgcgcacgcgagttcgtcaccgagacg
tggggggtgccggccgacgaggtcgaacgcggcttcgaacgcatcgaggagtccgtcatc
cagacagggctggaccgctggacctga
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