Natronomonas pharaonis: NP_4106A
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Entry
NP_4106A CDS
T00279
Symbol
tfeA
Name
(GenBank) transcription initiation factor TFE
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nph
Natronomonas pharaonis
Pathway
nph03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NP_4106A (tfeA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_4106A (tfeA)
Transcription machinery [BR:
nph03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NP_4106A (tfeA)
Prokaryotic type
Archaeal type
TFE
NP_4106A (tfeA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
DUF7129
HypA
Zn_ribbon_8
Zn_ribbon_LysW
DNA_ligase_ZBD
Zn_ribbon_RPAB4
Acetyltransf_4
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAI50144
UniProt:
Q3IP08
LinkDB
All DBs
Position
complement(2000378..2000905)
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AA seq
175 aa
AA seq
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MAFEDLLNDPVIQKYLHELVGPTGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFQYENIPEQLEEEMHRLLEALENRRQYESENEFYLCG
ECQLRFEFDEAMEFGFECPECGGRLESMENDRLVNAMEQHIEALRDELHVETAEA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctgaacgacccggtgattcagaagtacctccacgagcttgtc
ggaccgacggggatgcccgtcgccgccgcgccgccggacggcgaggttaccgacgaggaa
ctcgcggaggagctcgggctcgaactcaacgacgtccgccgggcgcttttcattctctac
gagaacgacttggcctcctaccggcggctccgcgacgaggactccggctggctgacctac
ctgtggacgttccagtacgagaacatcccggaacagctcgaagaggagatgcaccggctg
ctggaggcgcttgaaaaccgcagacagtacgaatccgaaaacgagttctacctctgtggg
gagtgtcagcttcgctttgagttcgacgaggccatggagttcggcttcgagtgtccggag
tgtggcggccggctggagtcgatggaaaacgaccggctggtcaacgccatggagcaacat
atcgaagcactgcgcgatgaactacacgtcgaaacggcggaagcctga
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