Natronomonas pharaonis: NP_4822A
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Entry
NP_4822A CDS
T00279
Symbol
tfbA6
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nph
Natronomonas pharaonis
Pathway
nph03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NP_4822A (tfbA6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nph03021
]
NP_4822A (tfbA6)
Transcription machinery [BR:
nph03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NP_4822A (tfbA6)
Prokaryotic type
Archaeal type
TFB
NP_4822A (tfbA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
CAI50502
UniProt:
A0A1U7EZ29
LinkDB
All DBs
Position
2354777..2355766
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AA seq
329 aa
AA seq
DB search
MVATVTSGSTNQRTSREASTEAEKAEEAAATAETVEPDAVDPDDVVKTADGELIHEPTGL
VLEDEHIDRGPEWRAFTHSERQSKSRVGAPTTQTMHDKGLTTQIDWKDKDAYGQSISSDK
RSQMNRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVTYRRALDEDL
IRGRSIEGAATATLYAACRQESIPRSLDEVAEVARVEQKEIGRTYRYLSQELGLEIKPAD
PKEYVPRFCSELALSEAVEQKTREIIDVTAEEGMLSGKSPTGYAAAAIYAASLLCNEKKT
QREVAEVAQVTEVTIRNRYQEQIEALELH
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtggctactgtgacgagcgggtctactaaccaacgaacgagccgcgaggcgagcaca
gaggccgaaaaagcagaggaagcggctgcaacggctgaaacggtcgagcccgacgcagtc
gaccccgacgacgtggtcaagaccgccgatggcgagctcatccatgaaccgacggggctc
gtgctcgaagacgagcatatcgaccgtggtccggagtggcgtgcgtttacccactccgag
cggcagtcgaaatcgcgtgttggggcgccgacgacccagacgatgcacgacaaggggctg
acgacccagatcgactggaaggacaaagacgcctacgggcagtcgatttcgtcggacaag
cggtcacagatgaaccgactgcggaagtggcaagagcggattcggaccaaggacgcgggc
gagcggaacctgcagttcgcgctgtcggaaatcgaccggatggcctcggcactgggcgtc
ccccggtcggtgcgggaggttgcgtcggttacgtatcggcgggcactggatgaagacttg
attcggggacgctcgatcgaaggggccgccacggcgacgctgtatgccgcctgccggcaa
gaaagcattccgcggtcgctcgacgaggtcgcagaggttgcccgcgtcgaacagaaggaa
atcggccggacctaccggtatctctcacaagaactcggcttggagatcaagcccgccgac
ccgaaggagtacgtcccgcgcttttgttcggagcttgcgctctctgaagccgtcgagcag
aagacccgagagatcatcgacgtaaccgccgaggagggaatgctttcggggaaatcgccg
acgggatacgccgccgccgcgatttacgctgcgtcactgctctgcaacgagaagaaaaca
caacgggaggtcgccgaagtcgcacaggtgacagaagtcactatccgcaaccgctatcag
gaacagatcgaagcgctcgaactccactga
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