Natronomonas pharaonis: NP_5228A
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Entry
NP_5228A CDS
T00279
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nph
Natronomonas pharaonis
Brite
KEGG Orthology (KO) [BR:
nph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nph03016
]
NP_5228A (truD)
Enzymes [BR:
nph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NP_5228A (truD)
Transfer RNA biogenesis [BR:
nph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NP_5228A (truD)
Prokaryotic type
NP_5228A (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAI50705
UniProt:
Q3IMF3
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All DBs
Position
2535397..2536704
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AA seq
435 aa
AA seq
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MRDSHPVEQTVGIEYYVTETDGTGGRLRDRPADFRVREREAFGADCRPLDADPGSYPHLV
FRATLREWDTNDFASAVSNALGVSRERVSWAGTKDKHAVTTQLFSVRHDDAALPDLDGAD
IEPIGRAGRPVLFGDLAGNEFELVIRDPDRPEHAEATAAELCDFGGGEAGVPNYFGTQRF
GSRRPITHRVGLDVLDGDWEAAAVRYVCESSEREPERTQEVREGIDADRDWAAAGERLPG
SLRFERAIANRLAEGAESPDDYRAALEELPSNLQRMFVNAAQSYVFNRILSERLRRGLPF
DEPVVGDVVCFSDSDGNPDPDRTQTVTESRLETVRRHCERGRAFVTAPLVGTETVFGDGE
PAEITREVLADVDVSPTDFELPGEFGSSGTRRAVLVTTDLTVEQEPLTLSFSLPKGSYAT
VVAREFLKADPEALS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgattctcaccctgtcgagcagaccgtcggtatcgagtattacgtgaccgagacc
gacgggacgggcggtcgcctgcgcgaccggccggccgacttccgggtccgcgagcgcgag
gccttcggcgccgactgtcgaccgctcgatgccgaccccggttcgtatccacatctggtg
ttccgagccacgctccgcgagtgggacaccaacgacttcgcgtccgcggtctcgaacgca
ctcggcgtcagccgcgagcgcgtctcgtgggccggaacgaaggacaaacacgccgtgacg
acacaactgttttctgttagacacgacgacgcggcgctgccggacctcgacggggctgac
atcgagccgatagggcgggccggccggccggtgctgttcggcgacctggcgggcaacgag
ttcgaactcgtcatccgcgaccccgaccggccggaacacgccgaggcgacggccgcagag
ctatgcgacttcggcggcggggaggccggcgtccccaactacttcgggacccagcggttc
gggtcgcggcggcccatcacccatcgggtcggcctcgacgtcctcgacggcgactgggag
gcggcggccgtccgctacgtctgtgagtcgagcgagcgcgaaccggaacggacacaggag
gtcagagagggaatcgacgccgaccgcgactgggcggctgccggcgagcggctgcccggg
agcctccggttcgagcgggccatcgcaaaccggctggccgaaggagccgaatcgccggac
gactaccgcgccgcactcgaagagctaccgagcaacctccagcggatgttcgtcaacgcg
gcccagtcgtacgtcttcaaccggattctctccgagcggctccggcgtgggctgccgttc
gacgagccggtcgtcggcgacgtggtctgtttttccgacagcgatggcaaccccgacccc
gaccgaacgcagacggtcaccgaatcgcggctagagaccgtccgtcggcactgcgagcgc
ggacgcgcgttcgtgactgcaccgcttgtcggcacggagacggtgttcggggacggcgag
ccggcggagattacccgcgaggtgcttgctgacgtcgatgtgtcgccgaccgacttcgag
ttgcccggcgagttcgggtcgtcgggcacacgacgggcagtgctggtaacgaccgacctc
accgtcgagcaggagccgctgacgctttcgttttcgctgccgaaaggaagctacgctacc
gtcgtcgccagagagtttctgaaggcggacccggaggcgttgtcctga
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