Neptunomonas phycophila: FLM49_00220
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Entry
FLM49_00220 CDS
T12106
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nphy Neptunomonas phycophila
Pathway
nphy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FLM49_00220 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nphy03021
]
FLM49_00220 (rho)
03019 Messenger RNA biogenesis [BR:
nphy03019
]
FLM49_00220 (rho)
Transcription machinery [BR:
nphy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FLM49_00220 (rho)
Messenger RNA biogenesis [BR:
nphy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FLM49_00220 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Fungal_virus_P2_C
S1CSD-TOTE-2
AAA
AAA_22
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QLE96162
LinkDB
All DBs
Position
48536..49795
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTQLKTKSVPELLEIAQEMGLDNLARSRKQDVIFAILKKHSKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKDSERYFALLKVNEIN
YDRPENAKNKILFENLTPLFAQERLRMEQGNGSTEDITARVLDLVSPMGKGQRALIVSPP
KAGKTLMLQNIANSITRNNPECHMIVLLIDERPEEVTDMQRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLTEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNSEVHLDRKIAERRVFPAINI
RRSGTRREDLLTSEDELQRMWILRKLLDSMDDSAATEFVIDKLKDFKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttacccaattaaaaacaaaaagcgtacctgagctgctagaaattgctcaggaa
atgggcctcgacaacttggctcgttctagaaaacaagatgttattttcgcaattcttaaa
aagcactctaaaagtggcgaagatatttatggtgatggtgttctggagatacttcaggac
ggctttggattcctgcgttcagcagactcatcttacttagccgggccggatgatatttat
gtatctcctagtcaaatccgtcgtttcaatttgcgtacaggcgatactatcgcgggcaaa
attcgcccgccaaaagatagcgaacgctatttcgcactgctcaaagttaatgaaattaac
tatgaccgtccggaaaacgctaaaaacaaaatcttattcgaaaacctgacaccgttgttt
gcgcaagagcgcttacgcatggagcaaggtaacggcagtacggaagatattactgctcgt
gtattggatttggtgtccccgatgggtaaaggtcagcgtgcgctgatcgtatctccgccc
aaagcgggtaaaaccttaatgctgcaaaacatcgcgaatagcattacgcgtaacaaccca
gaatgccatatgatcgtgttgttgatcgatgagcgacctgaggaagttaccgacatgcag
cgtaccgttcgcggtgaagtggtcgcttctacatttgatgagccaccagcacgtcacgta
caggtagccgaaatggttatcgaaaaagcgaaacgtttaactgagcacaaaaaggatgtt
gttatcctgcttgactccattacgcgtttagctcgtgcttataacacggtcatcccgtca
tccggtaaagtactaaccggtggtgttgatgcgcatgctttggagcgtcctaagcgtttc
ttcggtgcggcacgtaacatcgaagaaggcggtagcttaaccattattgcaaccgcattg
gttgataccggctctaaaatggacgaagttatctttgaagaatttaaaggtacgggtaac
tcagaagttcatttggatcgtaaaatcgcagagcgccgtgtgttccctgctattaatatt
cgtcgttccggcacgcgccgtgaagacttgctaactagcgaagacgaattacagcgtatg
tggattctgcgtaagttgctcgattctatggacgattcagcagcaactgagttcgtgatc
gacaagctaaaagactttaagacaaacgacgagtttttcctttccatgaagcgaaagtaa
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