Nocardioides piscis: G7071_04325
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Entry
G7071_04325 CDS
T07459
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
npi
Nocardioides piscis
Pathway
npi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G7071_04325 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npi03400
]
G7071_04325 (recD)
Enzymes [BR:
npi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G7071_04325 (recD)
DNA repair and recombination proteins [BR:
npi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G7071_04325 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
AAA_22
PhoH
AAA_16
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_25
TrwB_AAD_bind
nSTAND3
NACHT
AAA_17
NTPase_1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QIK74767
UniProt:
A0A6G7YDS9
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All DBs
Position
870921..872675
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AA seq
584 aa
AA seq
DB search
MSDLFEPTDAHDRDLALRAPAPLDAFNAAGVITAADIHVATTVGRLGGESDPDVLLAVAL
AVRAVRHGSVCLELAHVATLLDDLGLPWPAADQWGAAIERSPLVGLGVLHWEHGLLYLDR
YHEQETQVLDDLAARASTRPGLDAELLAASLARVFPDEGYAEQRDACAHAAGAWTSVITG
GPGTGKTTAVAGLLVALHEQAQARGEHLRIALAAPTGKAAARLEQAVRDRAAEFSDADRA
RLADVSAMTLHRLLRQHPGNRTRFRHHRGNRLPHDLVVVDETSMVSLTMMARLLEAVRPD
ARLVFVGDPDQLSSVDAGAVLTDLVRGYESRPDSPVAALATTRRFGAEIAALADALRVGN
ADAAIEVLRAGGQAIEWVTDTDPASAIRATALPAALAVRDAASAGDGVKALAALDRHRLL
CAHRDGPFGVRHWNRRIEQWLTAETGDPLHEAAYLGRPILVTANDYALRVFNGDTGVILD
TPAGRRVAVSTGSDPLILAPSRLGDVETMHAMTIHKSQGSQADVVTVLLPDQESRLLTRE
LFYTAVTRARSKVRIIGPEVAVRAAIERQAQRASGLRARLATHR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcttcgaacccaccgacgcgcacgaccgtgacctggccctgcgcgctccg
gcaccgctcgacgccttcaacgccgccggcgtcatcaccgcggccgacatccacgtcgcc
accacggtcgggcgcctgggcggcgagagcgacccggacgtgttgctcgcggtcgcgctg
gcggtgcgcgccgtacgccacggatcggtgtgcctggagctggcccacgtcgccaccctg
ctcgacgacctgggcctgccctggcccgccgccgaccagtggggagccgcgatcgagcgc
agtccgctggtgggcctgggagtgctgcactgggagcacggcctgctctatctcgaccgc
taccacgagcaggagacccaggtgctcgacgacctggctgcgcgggcaagcaccaggccg
ggcctcgacgcggagctgctcgcggcctccctggcgcgggtgttccccgacgagggatat
gccgagcagcgcgacgcgtgtgcccacgcggcaggtgcgtggaccagcgtcatcaccggt
ggtcccggcaccggcaagaccacggccgtcgcgggcctcctcgtcgcgctgcacgagcag
gcgcaggcccgcggcgagcacctccgcatcgccctggctgctccgaccggcaaggccgcg
gcccggctggagcaggcggtgcgcgaccgggccgcagagttcagcgacgccgaccgcgcc
cggctggccgacgtcagcgcgatgacgctgcaccgcctgctgcgccagcaccccggcaac
cgcacccgcttccgccaccaccgcggcaaccggctgccccacgacctcgtcgtggtcgac
gagacgtcgatggtctcgctgacgatgatggccaggctcctggaggcggtgcgtcccgac
gcccgactcgtcttcgtgggcgaccccgaccagctctcgtcggtcgacgccggtgcggtg
ctgacagacctggtgcgcggctatgagtcccggccggactcccccgtcgcagccctggcc
accacccgccgcttcggggcggagatcgccgccctcgccgacgcgctgcgcgtcggcaac
gccgacgcggccatcgaggtcctgcgagccggcgggcaggcgatcgagtgggtcaccgac
accgaccctgcctcagcgatccgggccaccgccctgccggcggcgctggccgtgcgcgac
gcagcctcggccggtgacggcgtcaaggcactggccgcgctcgaccggcaccgcctcctc
tgcgcccaccgcgacggacccttcggcgtgcgtcactggaaccgccgtatcgagcagtgg
ctcaccgccgagaccggtgacccgctccacgaggcggcctatctcggccgtccgatcctg
gtcacggccaacgactatgcgctgcgcgtcttcaacggcgacaccggcgtcatcctcgac
accccggcgggacggcgggtcgcggtctcgaccggcagcgacccgctcatcctcgctccg
tcacggctgggcgacgtggagacgatgcacgcgatgacgatccacaagagccagggcagc
caggccgacgtggtcacggtgcttcttcccgaccaggagtcccggctgctgacgcgcgag
ctgttctacaccgccgtcacccgggcgcggtccaaggtccgcatcatcgggccagaggtt
gccgtgcgggcggcgatcgaacgccaggcccagcgcgccagcgggctgcgggcgcggctg
gccacccaccgctag
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