Nocardioides piscis: G7071_04865
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Entry
G7071_04865 CDS
T07459
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
npi
Nocardioides piscis
Pathway
npi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7071_04865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npi03019
]
G7071_04865
03400 DNA repair and recombination proteins [BR:
npi03400
]
G7071_04865
Enzymes [BR:
npi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7071_04865
Messenger RNA biogenesis [BR:
npi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7071_04865
DNA repair and recombination proteins [BR:
npi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G7071_04865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QIK74859
UniProt:
A0A6G7YDQ7
LinkDB
All DBs
Position
complement(977853..979967)
Genome browser
AA seq
704 aa
AA seq
DB search
MTTEEIRAEARGQAEAHLRALVGSDSAVLRDDQWSAIEALAVDSRRALVVQRTGWGKSAV
YFVATLLLRSRGAGPTVIVSPLLALMRNQIAAAERAGIRAVTINSTNIEQWQPINDAINA
GEVDVLLVSPERLNNPGFRDEVMPRLAATCGLLVVDEAHCISDWGHDFRPDYRRIRTLLA
DLPPGIPVLATTATANARVTADVAEQLVSATGEQEVLVLRGSLDRESLRLGVVRLRTAEM
RLAWLADHLAEQPGSGIVYCLTVAATQEVAAFLRDRGHEVAAYSGQTDPTERAALESALV
EGRVKALVATSALGMGFDASLGFVINLGAPQSPVAYYQQVGRAGRGTDDATVVLLPQLED
RDIWAYFASLAFPPEQLVRQTLEVLAQAPGSMSTVALETYVELSRNRLETLLKVLDVDGA
VRRVKGGWVATGEPWSYDADRYARVAQARQREQDAMLDYLDTDRCRMRFLRDQLDDPDAT
DCGRCDNCGGLTLSSSVTEAAVDEAGAALSRPGVAIEPRKMWPTALANLGLDLKGKIGDG
PVEGRAIARLTDLGHGQALRALFRADAVDGPVPPPLASALLTVMKDWAGDWTDRPVAIVG
VESASRPQLVGDLATGLSRVMQIPVVGRFAIVDASVAPGQGAANSAQRVAAIHRRFRLEA
DVPAGPVLLVDDLVVSGWTLTVAGVALREAGATAVLPLTLGTQT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgaggagatccgcgccgaggcccgcggccaggccgaggcccatctgcgcgcg
ctcgtcggcagcgacagtgccgtgctgcgcgacgaccagtggtcggccatcgaggcactg
gctgtcgactcccgtcgtgcgctggtcgtccagcgcaccggctggggcaagtctgccgtc
tacttcgtcgcgaccctgctgctgcgctcgcgcggagccggaccgacggtcatcgtctcc
ccgctgctcgccctgatgcgcaaccagatcgctgctgccgagcgtgccggcatccgcgcc
gtgacgatcaactccaccaacatcgagcagtggcagccgatcaacgacgccatcaacgcg
ggcgaggtcgacgtgctgctcgtcagtcctgagcggctcaacaaccccggcttccgcgac
gaggtgatgccgaggctggcggcgacctgcggcctcctggtggtcgacgaggcccactgc
atctccgactggggacacgacttccgccccgactaccgccgcatccgcacgctgctcgcc
gacctgccgcccggcatcccggtcctcgccacgacagcgacggccaacgcgcgcgtcacc
gccgacgtcgccgagcagctcgtctcggccaccggcgagcaggaggtgctcgtcctgcgc
ggctccctcgaccgggagtcgttgcgcctgggcgtggtgcgcctcaggaccgccgagatg
aggctggcgtggctcgccgaccacctggcagagcagcccggctcagggatcgtctattgc
ctgaccgtcgctgcgacccaggaggtcgcggccttcctccgcgaccgcggccacgaggtg
gctgcctattccgggcagaccgacccgaccgagcgggccgcgctggagagcgcgctggtc
gaggggcgggtcaaggccctggtcgcgacgtccgcgctcggcatgggcttcgacgcatcg
ctcggcttcgtgatcaacctcggcgccccacagtcaccggtggcctactaccaacaggtg
ggccgcgccggtcgcggcaccgacgacgcaaccgtcgtcttgttgccacagctcgaggac
cgcgacatctgggcatacttcgcgtccctcgccttcccacccgaacagctcgtcaggcag
acactcgaggtcctcgcgcaggctcccgggtcgatgagcaccgtggcgctggagacctat
gtcgagctgagccgcaaccgcctcgagaccctgctcaaggtcctcgatgtcgacggcgcc
gtacgccgcgtcaagggtggctgggtcgcgaccggcgagccgtggtcctacgacgccgac
cgctatgcccgggtcgcccaggccaggcagcgcgagcaggacgcgatgctcgactacctc
gacaccgaccggtgccggatgcgtttcctgcgcgaccagctcgacgaccccgacgcgacc
gactgcgggcgctgtgacaactgcggagggctcaccctctcctcgagcgtcaccgaggcg
gccgtcgacgaggcaggcgcagccctgtcccgaccgggcgtggcgatcgagccgcgcaag
atgtggcccacggcgctggccaacctcgggctcgacctcaagggcaagatcggcgacggg
cctgtcgagggccgggcgatcgctcgcctgaccgatctcggccacggccaggcgctgcgt
gcgctgttccgcgccgacgccgtcgacggcccggtgccgccgccgctggccagcgcgctg
ctgaccgtgatgaaggactgggccggtgactggaccgaccggcccgtggccatcgtcggg
gtggagtcggcgtcccgaccacagctcgtgggcgacctggcgaccgggctctcacgcgtc
atgcagatcccggtcgtcggacggttcgccatcgtcgacgcgagcgtcgctcccggtcag
ggcgcagccaactccgcgcagcgcgtggccgccatccaccgccgcttccggctggaggcc
gacgtccctgccggtccggtgctgctcgtcgacgacctggtggtcagcggctggacgttg
acggtcgctggggtcgccctgcgcgaggccggcgccaccgcggtgctgccgctgacgctc
ggcacccagacctga
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