Nocardioides piscis: G7071_11080
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Entry
G7071_11080 CDS
T07459
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
npi
Nocardioides piscis
Pathway
npi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7071_11080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npi03021
]
G7071_11080
03019 Messenger RNA biogenesis [BR:
npi03019
]
G7071_11080
Transcription machinery [BR:
npi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G7071_11080
Messenger RNA biogenesis [BR:
npi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7071_11080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
FANC_SAP
AAA_22
DUF1408
Motif
Other DBs
NCBI-ProteinID:
QIK75905
UniProt:
A0A6G7YGG7
LinkDB
All DBs
Position
2247245..2249146
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AA seq
633 aa
AA seq
DB search
MTESTDSPTAKKPAKKGGLSSMLLADLKSMAGGLGIAGAGSMKKAQLVDAIKSAQGGARP
AKAEATPEPRTEPTAPREARTETARETERETQRDGQPQAAQSAPVVRTRTRNQPKAESSA
SEATAKPESESRTEPDRGGDGGPGGDTSDEGQSRQRTRNRQQGQQADKQQGKSQPEQQGK
SQPEQQGKQGDKQPDQQGKQGDKQQGQQGRTEQRPADHDDDGEGGSRRNRRRRGRDRDRD
RQGVRPLGGDRNEPDTTVLEDDVLVPAAGILDVLDNYAFVRTSGYLPGTDDVYLSLSMVR
KFGLRRGDAVVGQVRQPREGERKEKFNPMVRIDSVNGTDPEAARERLDFETFTPVHPTER
LRQETTTTELVGRAIDIAAPIGKGQRGLLIAPPKTGRTTVLRSIAQSISRNDPDAHLMVV
LLDARPEEVTDFQREIKGEVIASTFDRPAGDHTMVAELAIERAKRLVELGHDVVLLLDSL
TSLGRAYNLSVPPSGRTLAGGVDAAAVHPPKRLFGAARNVEGGGSLTVLATLLVETGSAT
DAAIFEEFGGTANMELRLSRELAEQGVFPAIDFVASGTRHDALLSSEQEVGIVASLRASM
SGDRVAAVRDVLTRLGKAQNNISFLSSLDSRRR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatcaactgactccccgaccgccaagaagcccgccaagaagggcggtctcagc
tccatgctgctcgccgacctcaagtcgatggccggtgggctgggcattgctggcgcggga
tcgatgaagaaggcccagctcgtcgacgcgatcaagagcgcgcagggcggggccaggccg
gccaaggccgaggccaccccggagcccaggaccgagcccactgcaccgcgcgaggcccgg
accgagacggcgcgcgagaccgagcgcgagacccagcgcgacggccagccgcaggccgcg
cagtccgcgccggtggtccggaccaggacccgcaaccagcccaaggccgagtcctcggcc
agcgaggccacggccaaacctgagtcggagtccaggaccgagcccgatcgtgggggcgac
ggcgggccgggtggggacacctcggacgagggtcagtcgcgacagcggacccggaaccgc
cagcagggtcagcaggctgacaagcagcagggcaagtcgcagccggagcaacagggcaag
tcgcagccggagcaacagggcaagcagggcgacaagcagccggaccagcagggcaagcag
ggcgacaagcagcagggccagcagggcaggaccgagcagcggccggccgaccacgacgac
gacggtgagggcggcagccgccgcaaccgccgccgccggggccgtgatcgcgaccgcgac
cgtcagggggtccgtccgctgggcggcgatcgcaacgagccggacaccacggtgctggag
gacgacgtcctggtgcccgcagccggcatcctcgacgtcctcgacaactacgcgttcgtc
cggacctcgggctatctgcccgggaccgatgacgtctatctctcgctgtcgatggtgcgc
aagttcgggctccgtcgcggcgacgccgtcgtggggcaggtgcgccagcccagggagggc
gagcgcaaggagaagttcaaccccatggtgcgcatcgacagcgtcaacggcaccgacccg
gaggccgctcgcgagcggctcgacttcgagacgttcacaccggtgcaccccaccgagcgg
ctgcgccaggagaccacgacgaccgagctggtggggcgtgccatcgacatcgccgccccg
atcggcaagggccagcgcggcctgctgatcgcgccgccgaagacgggccgcaccaccgtg
ctccgctccatcgcccagtccatctcgcgcaacgaccccgacgcccacctgatggtggtc
ctgctcgacgcgcgccccgaggaggtcaccgacttccagcgcgagatcaagggcgaggtg
atcgcctccaccttcgaccgacccgccggcgaccacacgatggtggccgagctggccatc
gagcgggccaagcgcctcgtggagctcgggcacgacgtggtcctgctgctcgactcgctg
accagcctggggcgtgcctacaacctgtcggtgccgcccagcggccggaccctggccggg
ggcgtcgacgccgccgccgtacacccgcccaagcgactcttcggcgccgcgcgcaacgtc
gagggcgggggctcgctgaccgtcctggcgaccctgctcgtcgagacgggctcggccacc
gacgccgccatcttcgaggagttcgggggtacggcgaacatggagctgcgcctgagccgg
gagctggccgagcagggggtcttcccggcgatcgacttcgtcgcctcgggcacccggcac
gatgcgctcctctccagcgagcaggaggtcgggatcgtcgcatcgctgcgggccagcatg
tccggggaccgggtggccgccgttcgcgacgtcctcacccggctcggcaaggcccagaac
aacatctcgttcctgagcagtctggattcgcgccgccgttga
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