Nocardioides piscis: G7071_12335
Help
Entry
G7071_12335 CDS
T07459
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
npi
Nocardioides piscis
Pathway
npi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7071_12335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npi03400
]
G7071_12335
DNA repair and recombination proteins [BR:
npi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7071_12335
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G7071_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_21
AAA_25
nSTAND1
AAA_22
AAA_33
Viral_helicase1
NACHT
ATPase
MeaB
SLFN-g3_helicase
DUF87
DUF5351
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QIK76097
UniProt:
A0A6G7YHK3
LinkDB
All DBs
Position
complement(2501938..2504403)
Genome browser
AA seq
821 aa
AA seq
DB search
MTIEQRDGFVQVRGAREHNLRDVDVDLPRDAIVAFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLHQVGAPHVQEISGLPPAVALQQRRGAASSRSTVGTITTLSNLLRILYSR
AGTYPAGADHLAAEAFSPNTAAGACPECHGLGVVHDVAEDLLVPDVSLSIRDGAIAAWPG
AWQAHNLRRIVKNLGIDVDRPWRELDRSDQQWLLFTDEQPSVLIRPQDKDGGGGRDYHGT
FTSARRHVRKVLAGSPSEKMRDKMLQFVRSTSCQACAGSGIRAQALAVTFAGVSIADANA
LPFTELADLLRPSVTDDSDDVAGRITGDLVSRIEVLLGLGLGYLALGRSSTTLSPGEAQR
LRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLDVLDRLKAAGNSLFVVEHDMDVVRRA
DWVVDIGPAAGEGGGRVLYSGPIAGLEEVSESATSAHLFGRVAKFEHAPRTPSHWLHLGG
VSRHNLQKVTLDVPLGALTAVTGVSGSGKSTLVVQVLAEVVRRHLGQPPVEADEEHEHDP
VTGDVEVLDVSGIDSFDRLVVVDQRPIGRTPRSNLATYTGLFDAVRRLYAATPLARERGY
GAGRFSFNVAQGRCETCQGEGFVSVELVFLPSTYAPCPSCHGARYNAETLEVTHRDRTVA
DVLAMSVDDAAEFLGDTPAAARGLTTLQEVGLGYLRLGQPATELSGGEAQRIKLATELQR
ANRGHSLYLLDEPTSGLHPSDTDLLLRQLHRLVDAGNTVVLVEHDLDTIATADWVVDLGP
GGGDAGGRVIASGTPSDVAQAGVGVTAKYLARYLARRLGGS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgaacagcgcgacgggttcgtccaggtccgcggcgcgcgggagcacaacctg
cgtgacgtcgacgtcgacctcccccgcgacgccatcgtcgccttcaccggggtctccggc
tcggggaagtcgtcgctggccttcggcaccctgtatgccgaggcgcagcgtcgctacttc
gagtccgtggcgccatacgcccgtcgcctgctgcaccaggtcggcgccccgcacgtgcag
gagatctcgggcctgccgccggcggtggccctccagcagcgccggggggcggcgagctcg
cggtccacggtcgggaccatcaccacgctgtccaacctgctgaggatcctctattcgcgg
gccggcacatatcccgccggtgccgaccacctcgccgccgaggcgttctcgcccaacacc
gccgcgggcgcctgcccggaatgtcacggcctcggcgtcgtgcacgacgtggccgaggac
ctgctcgtccccgacgtctcgctcagcatccgtgacggcgcgatcgccgcctggcccggc
gcctggcaggcgcacaacctgcgacgcatcgtgaagaacctcggcatcgacgtcgaccgc
ccgtggcgcgagctcgatcgctcggaccagcagtggctgctcttcaccgacgagcagccc
tcggtgctgatccggccgcaggacaaggacggaggcggtggccgggactaccacggcacc
ttcaccagcgcccgccgccacgtccgcaaggtgctcgccggctcaccgagcgagaagatg
cgcgacaagatgctccagttcgtgcgtagcacctcctgccaggcctgcgcgggcagcggc
atcagggcccaggccctcgcggtcaccttcgccggggtctcgatcgccgacgccaacgca
ctgccgttcaccgagctggccgacctcctgcggccgtccgtcactgatgacagcgacgac
gtcgccgggcgcatcaccggcgacctcgtgtcccggatcgaggtgctgctcggcctcggt
ctcggctacctggcactgggccgcagctccacgaccctctcgccgggcgaggcgcaacgc
ctgcggatcgccacccagctgcgctcgggtctcttcggcgtcgtctacgtcctcgacgag
ccgtccgcggggctgcacccggccgacgccgagccgctcctcgacgtcctcgaccgtctc
aaggcggccggcaactcgctcttcgtcgtcgagcacgacatggacgtcgtacgccgggcc
gactgggtcgtcgacatcggacccgccgcaggcgagggcggcggacgggtgctctattcc
ggcccgatcgccggcctggaggaggtctcggaatcggccaccagcgcccatctcttcgga
cgggtcgcgaagttcgagcacgcaccccgcaccccttcccactggctgcacctcggcggc
gtctcgcgccacaacctccagaaggtcaccctcgacgtgccgctcggcgcactgaccgcc
gtgaccggcgtctccggctccggcaagtcgaccctcgtggtgcaggtgctcgccgaggtc
gtccgccgccacctgggccagcccccggtcgaggccgacgaggagcacgagcacgacccc
gtgaccggggacgttgaggtgctcgacgtctcgggcatcgactccttcgaccgcctcgtc
gtggtcgaccaacgccccatcggccggacaccgaggtccaacctggcgacctacaccggc
ctgttcgatgcagttcgacggctctatgccgccaccccgctcgccagggagcgcgggtac
ggcgccggccggttctccttcaacgtggcccagggacggtgcgagacctgccagggagag
ggcttcgtgtcggtcgagctggtgttcctccccagcacctatgcgccgtgcccgagctgt
cacggcgcccgctacaacgccgagacgctggaggtgacccaccgcgaccgcacggtcgcc
gacgtgctcgcgatgtcggtcgacgacgcggccgagttcctgggcgacacacccgcggcg
gcacgtggcctgacgacgctgcaggaggtcgggctgggctacctccggctgggacagcct
gcgaccgagctcagcggcggtgaggcgcagcggatcaagctcgccaccgagctgcagcgc
gccaaccggggccacagcctgtatctcctcgacgagccgacctcgggcctgcacccgtcc
gacacagacctcctgctgcgtcagctgcaccggctggtggacgccggcaacaccgtggtc
ctcgtcgagcacgacctcgacaccatcgccacggccgactgggtcgtcgatctcggtccg
gggggcggcgacgccggcggccgggtgatcgcctccggcaccccgagcgacgtcgcgcag
gcgggcgtgggcgtcaccgcgaaatacctggcgcgatacctggcgcgccgcctgggcggg
tcgtga
DBGET
integrated database retrieval system
