Nocardioides piscis: G7071_16640
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Entry
G7071_16640 CDS
T07459
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
npi
Nocardioides piscis
Pathway
npi03030
DNA replication
npi03430
Mismatch repair
npi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7071_16640 (dnaE)
03430 Mismatch repair
G7071_16640 (dnaE)
03440 Homologous recombination
G7071_16640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npi03032
]
G7071_16640 (dnaE)
03400 DNA repair and recombination proteins [BR:
npi03400
]
G7071_16640 (dnaE)
Enzymes [BR:
npi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7071_16640 (dnaE)
DNA replication proteins [BR:
npi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7071_16640 (dnaE)
DNA repair and recombination proteins [BR:
npi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7071_16640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
MCM10_OB
WD40_Prp19
Motif
Other DBs
NCBI-ProteinID:
QIK76812
UniProt:
A0A6G7YJA2
LinkDB
All DBs
Position
complement(3381361..3384918)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSAGSQDNFVHLHVHTEYSMLDGAARLKDLAERTAELQMPAVAMTDHGNVFGAYEFYRQC
KAAGVKPIIGMEAYFTPNISRFERKRVNLYKGGPDDVSSRGAYTHMTLLSESTEGMHNLF
RISTGAWRDGFFQNPRADRDLLAQHSSGIIGTTGCPSGEIQVHLRHDNYDAARQTAADFQ
EILGRDNYFLELMDHGLDIERRVRDGLLRLAKDLRIPLLATNDSHYVNQEDAASQEHLLC
INSGSTMDIPAGDGPGQRFAFSGDGYYLKSAAEMRSLWVDKYDLREACDNTLWIAERCDV
AFTEGSGTFMPKFPCPPGEDENSWLVKEVERGLHVRYPAGIPDAVRKQADFEVGVITGMG
FPGYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLVHGLIFERFLNPDR
VSMPDFDIDFDERRRGEVIRYVTEKYGDERVSYIVTYGTIKAKQAVKDSSRILGYPFAMG
DRITKAMPAAVMGKDVPLQEIFNSEHKRYGEGGEFRQLYEGDHDVKKVVDTAMGIEGLKR
QWGVHAAGVIMSSEPLLDIIPMLKRPADGAMITQFDYPTCESLGLIKMDFLGLRNLTVLD
DAVKNIRVNRGEEIVLEDLELTDEATYKLLQRGDTLGVFQLDGGPMRALLRSMRPDTFED
ISAVGALYRPGPMGADSHNKYARRKTGREPVEALHPELADALEDVLGETYGLIVYQEQVM
AIAQKLAGYTLGQADILRRAMGKKKKEELDKQFAGFSAGMSERGYSHGAIKTLWDTLLPF
SDYAFNKAHSAAYGLVSYWTAFLKANYPAEYMAALLTSTRDDKDKSAIYLNECRRMKIQV
LPPDVNESHADFTPVGTDIRFGLTAIRNVGANVVDGIVTAREEKGRYADFNDFMDKIPVN
VCNKRVIESLIKAGAFDEMSHRRRALVTVHEVAVDQAIDVKKNEAIGQDSLFGGLDEADG
GFGASVTIPDIDEWDKMTLLGHEREMLGLYVSDHPLLGLEHVLQTGTDCTIGQLMLDEER
AHGSTLTISGLVTSVQRKITKKGDSWATVTLEDLDGAIEVLLFPSAYQLAAGHLVEDAII
RVKGQLSRDKDQPELRAQEVTVPDLSDGPSGPVSVNLPQTRINPGVVDSLKEVLATHPGV
TEVLLNVRMREKTIVLKVGDHHRVTPSPALFADLKQLLGPGCLSG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctggctcccaggacaacttcgtccacctgcacgtgcacaccgaatactcgatg
ctcgacggagccgcacgtctcaaggacctcgccgagcgcaccgccgagctgcagatgccg
gcggtcgccatgaccgaccacggcaacgtgttcggcgcctatgagttctatcggcagtgc
aaggctgccggggtcaagccgatcatcggcatggaggcctacttcacgcccaacatcagc
cgcttcgagcgcaagcgcgtcaacctctacaagggcggtcccgacgacgtctcgagccgc
ggcgcctacactcacatgacgttgctcagcgagtcgaccgaggggatgcacaacctcttc
cggatctcgaccggggcgtggcgcgacggcttcttccagaatccgcgcgccgaccgcgac
ctgctcgcccagcacagctcgggcatcatcggcacgaccggctgcccgagcggcgagatc
caggtccacctgcgtcacgacaactacgacgcggcccgtcagaccgcggcggacttccag
gagatcctgggacgcgacaactacttcctcgagctgatggaccacgggctcgacatcgag
cgccgcgtccgcgacgggctgctgcggctggccaaggacctgcggatcccgctcctggcc
accaacgactcccactacgtcaaccaggaagacgccgccagccaggaacacctcctgtgc
atcaactccggctcgacgatggacatcccggccggcgacggccccggccaacggttcgcg
ttctcgggcgacggctactacctcaagtcggcggcggagatgcgctcgctgtgggtcgac
aagtacgacctgcgcgaagcctgtgacaacacgctgtggatcgccgaacgctgcgacgtc
gccttcaccgagggcagcggcacgttcatgcccaagttcccctgcccgcccggggaggac
gagaactcctggctggtcaaggaggtcgagcgcggcctccacgtgcgctatcccgccggc
atccccgacgcggtgcgcaagcaggccgacttcgaggtcggcgtcatcacgggcatgggc
ttccccggctacttcctggtcgtggccgacttcatcaactgggccaagaacaacggcatc
cgcgtcggtccggggcgtggctccggcgccggctcgatggtcgcctacgcgatgcggatc
accgacctcgatccgctggtccacggtctgatcttcgagcggttcctcaaccccgaccgg
gtctcgatgcccgacttcgacatcgacttcgacgagcgccgccgcggcgaggtcatccgc
tacgtcaccgagaaatatggcgacgagcgggtctcctacatcgtcacctacggcaccatc
aaggccaagcaggccgtcaaggactcctcgcgcatcctcggctatccgttcgccatgggc
gaccgcatcaccaaggccatgccggcagccgtcatgggcaaggacgtgccgctgcaggag
atcttcaactccgagcacaagcgctacggcgagggtggggagttccgccagctctacgag
ggtgaccacgacgtcaagaaggtcgtcgacaccgcgatgggcatcgagggcctgaagcgg
cagtggggcgtccacgccgccggcgtgatcatgtccagcgagccgctgctcgacatcatt
cccatgctcaagcggcccgccgacggggcgatgatcacccagttcgactatcccacctgc
gagtcgctcggcctgatcaagatggacttcctggggttgcgcaacctcaccgtcctcgac
gacgcggtgaagaacatccgggtcaatcgcggcgaggagatcgtcctcgaggatctcgag
ctcaccgacgaggcgacctacaagctcctccagcgcggcgacaccctcggcgtcttccag
ctcgacggcggtccgatgcgggcgttgctgcgctcgatgcggcccgacacgttcgaggac
atctcggccgtgggcgcgctctaccgccccggcccgatgggcgccgactcccacaacaaa
tatgcccgccgcaagaccggccgcgagccggtcgaggcactccacccggagctcgccgac
gcgctcgaggacgtcctgggcgagacctacggcctgatcgtctatcaggagcaggtcatg
gcgatcgcgcagaagctcgccggctacacgctcggccaggccgacatcctgcgccgcgcg
atgggcaagaagaagaaggaggagctggacaagcagttcgccggcttctccgcgggcatg
agcgagcgcggctacagccatggcgccatcaagaccctgtgggacacgctgctgccgttc
tccgactacgccttcaacaaggcccactcggcggcatacggcctggtctcctactggacg
gcgttcctcaaggccaactacccggccgaatacatggccgcgctgctgacgtcgacccgc
gacgacaaggacaagtcggcgatctatctcaacgagtgccgccggatgaagatccaggtg
ctcccgcccgacgtcaacgagtcgcacgccgacttcaccccggtcggcaccgacatccgc
ttcggcctcaccgcgatccgcaacgtcggcgccaacgtcgtcgacggcatcgtcacggcc
cgggaggagaaggggcgctacgccgacttcaacgacttcatggacaagatcccggtcaac
gtctgcaacaagcgcgtgatcgagtcgctgatcaaggccggggccttcgacgagatgtcg
caccggcgccgggcgctggtcaccgtccacgaggtcgccgtcgaccaggccatcgacgtg
aagaagaacgaggcgatcggccaggactcgctgttcggagggctcgacgaggccgacggc
ggcttcggcgcgagcgtgacgatccccgacatcgacgagtgggacaagatgacgctgctc
ggccacgagcgcgagatgctcggcctctacgtctccgaccaccctctcctcggtctcgag
cacgtgctccagaccggcaccgactgcaccatcggccagctcatgctcgacgaggaacgc
gcccacgggtcgacgttgacgatcagcggcctggtgaccagcgtccagcgcaagatcacc
aagaagggcgactcctgggccacggtcaccctcgaggacctcgacggcgccatcgaggtg
ctgctgttccccagcgcctaccagctggctgcgggccacctggtcgaggacgcgatcatc
cgggtcaagggccagctctctcgcgacaaggaccagccggagctgcgcgcacaggaggtc
acggtgcccgacctctccgacgggccgtccggcccggtgtcggtcaacctgccccagacc
cggatcaacccgggcgtcgtcgacagcctcaaggaggtcctggccacccaccccggtgtc
accgaggtcctgctcaacgtcaggatgcgtgagaagacgatcgtgctcaaggtgggtgac
caccatcgcgtgacgccgtcaccggccctgttcgccgacctcaagcagctcctcgggccg
gggtgcctgtcgggatga
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