Natrinema pallidum: FGF80_00655
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Entry
FGF80_00655 CDS
T06072
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
npl
Natrinema pallidum
Brite
KEGG Orthology (KO) [BR:
npl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npl03000
]
FGF80_00655
Transcription factors [BR:
npl03000
]
Prokaryotic type
Helix-turn-helix
Other families
FGF80_00655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS_3
PAS_4
PAS
BAT
GAF_2
PAS_8
HTH_10
GAF
GAF_3
PAS_11
Sigma70_r4
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QCW01837
UniProt:
A0A4P9TBI2
LinkDB
All DBs
Position
127653..132116
Genome browser
AA seq
1487 aa
AA seq
DB search
MVVAAVHTGTLDGATRKPVALLLGAVVVLGAVSIGVVIFDSTTLGLGLGPEPGLVVFGLA
ARSGPDRSTDIERLTDDLRRFVSRLDGDAAASAGNDTDAEDATIDEPIEFTIDRDDEIGR
LSEAVDDLATVARTRDRRLEQVRAFTDDMLDAVTDIVYLLDEDGQVQRWNEALGAASGYS
DAEIGEMHALDFFDEADHELVTTAIEDVLETGGTRVEVALRTKSGESIPYEFVASPLDDP
AGNAVIAGIGRDISDRRAKEQRLERHEAFMNDIIDALDDVFYILDEDGNLRRWNETLVEV
SGYSDAEIRERHALDFFDEANQAVIRDSIEDAFETGDTHVEAALQTKSGESIPYEFVASV
LEDPDGNAVEVGIGRDITDRKATERRLRERETSLERTMHMLEQSQRLANVGAWELDVTAE
SLEPRWTDEVNRIHGLPPDAEIGLDRALEFYHPADRPLIEGAIERAIEDGEPYDLEVRLV
TDDGEQRWVRTIGEPIRDGEETPHPDDRRSGSDDGEIVKLRGSFQDITERKERERELERS
ETIIQALDELVYTIDETGHFTFLNDALTSITGYDPEDLIGEHVSTVMDEDDLETARDRVR
DLLRAGDPSRTFEMELETVDGDVIDTENHMALLPMADGEFAGTAGVIRDITERKERERDL
ERFETIVQALDELVYTLDATGRFTFLNDAAKPILGYDPEELIGEHAAAIIPSDDIERARD
MIRELLRFDEPSRTVEIILETADDERIDAENHIALLPSSEDGFAGTAGVVRDITDRKERE
RELERTTELLKQAERLAGIGGWELDISGDSREVTFTDGLRRLYELPSDVTLDSDLASSFP
HPEDRPAVLEIVDAALEDGESYEIEHRMQTVAGNERWVQSIGEPVRADGRRSGGQSDDIV
GVRGTIQDITAHKERELALESLHSAARDLLGTETDTEIAELVVDTAAEILDAAGVAVYRL
DSDVNRFEPVVYTDGFETLSDGPPSVAVGDDDSVLWNAYVTGTGTVVDDPMSFDQSRVFG
SAVESGAVVPIGDHGVFAVASGETPIDADARRLIETLVATTEAAFDRLESEASLREREAE
LEERNRRLNRQIESTELIRRIDQLLIGADSRAEIERTVPDRLLEAGNVAFAWIGTLDASG
TRLEPRAWAGQRQTYLDDVSLEYDASMEPAVRTARTETTSVVSNAVEGLQGEGWRRHALD
CGFQSVISVPLSYAEYTYGVLTVYADEPDAFGDLERTVLTELGAGIANAITAVKTREALH
AERLLELTLRIGGADDLLSRIATATGARVEYEGLGSHSTDETLLFFETSGVPADDVRSVL
DDLVSVTDYRLLTEADDECRFEATVAGDVVASRLVRHGASPRSMHATDDGIEVTVDVPTG
TDVREFVETLRDQYATVELQARHHVERSMGTGSELVTSLFDALTDRQLEVLRTAYFAGFF
DWPRESTGEEIAAMLDVTQPTVNRHLRIGQQRVLARLFEDELLTTGE
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtcgccgcggttcacactggaacgctcgacggcgctacacggaagccggtcgca
ctgctactcggggcagtcgtcgtgctgggcgctgtcagcatcggcgtggtgatcttcgac
agcacgaccctcggactcggattggggccggagcccgggctggtcgtcttcgggctcgcc
gcgcgcagcggtcccgatcgatcgaccgatatcgaacgactaaccgacgacctccgtcga
ttcgtctcacgtctcgacggcgacgcagccgcgtcggccggcaacgataccgatgctgag
gacgcgaccatcgacgagccgatcgagttcacgatcgaccgggacgacgagatcggccgg
ctctcggaagccgtcgacgacctcgcgaccgtggcccgcacccgcgaccgtcgtctcgag
caggtccgtgcgttcaccgatgatatgctcgatgccgtcaccgacatcgtctacctgctc
gacgaggacgggcaggtacagcgctggaacgaggcgctgggcgcggcatcgggctactcg
gacgccgaaatcggcgagatgcacgcgcttgacttcttcgacgaagcggatcacgaactt
gtcacgaccgcgatcgaggacgtactcgagacgggcggtacacgcgtcgaagtggcgtta
cgaacgaaatccggcgaatcgataccgtacgagttcgtcgcctcgccgctcgacgatccg
gccggcaacgcggtcatcgccggcatcggccgcgacatcagcgaccgcagggcgaaagaa
cagcgcctcgagcgccacgaggcgttcatgaacgatatcatcgacgcgttagacgacgtg
ttctacatcctcgacgaggacgggaacctccggcgctggaacgagacgctggtcgaggta
tcgggctattcggacgccgagatcagggagagacacgccctggatttcttcgacgaggcg
aaccaggcagtgatccgggactcgatcgaggatgccttcgagacgggcgatacgcacgtc
gaagcggcgttgcaaacgaaatccggcgaatcgataccgtacgagttcgtcgcctcggtg
ctcgaggaccccgacggcaacgcggtcgaagtcgggatcggccgggacatcaccgatcgc
aaggcaacggagcggcggcttcgcgagcgcgaaacgagcctcgagcggaccatgcacatg
ctcgagcagtcccagcggctggccaacgtcggggcctgggaactcgacgtcaccgcggag
tcgctcgaaccccggtggaccgacgaggtcaaccgaatccacggcctgccgcccgacgcg
gagatcggtctggatcgggccctcgagttctatcatccggcggaccggccgctgatcgag
ggggcgatcgagcgcgcgatcgaggacggcgagccgtacgatctcgaagtccgtctggtc
acggacgacggggagcagcggtgggttcggacgatcggtgaacccatccgagacggcgaa
gagaccccgcacccagacgaccgtcggtcggggtccgacgacggcgaaatcgtcaagctt
cggggctcgtttcaggatatcaccgagcgcaaggagcgcgaacgggaactcgagcggtcc
gaaacgatcattcaggcgctggacgaactggtgtacacgatcgacgagacggggcacttt
accttcctgaacgacgctctcacgtcgatcaccggctacgatcccgaggacctgatcggt
gagcacgtctcgaccgtgatggacgaggacgacctcgagacggctcgcgaccgggtccgt
gacctgctgcgtgccggggacccctctcggacgttcgagatggaactcgagaccgtcgac
ggcgacgtgatcgatacggagaaccacatggcgctgttgccgatggccgacggcgagttc
gccggaaccgcgggcgtcatccgtgacattaccgagcgcaaggagcgcgaacgtgacctc
gagcgcttcgagacgatcgttcaggcgctggacgaactggtgtatacgctcgacgccacg
ggacggttcaccttcctgaacgacgccgccaagccgatactcggctacgaccccgaggaa
ctgatcggtgaacacgctgcagcgatcattccatcggacgacatcgaacgggcccgggac
atgattcgggaactgctgcggttcgacgagccctctcgaaccgtcgagatcatcctcgag
acggccgatgacgaacggatcgatgccgaaaaccacatcgcgctgttgccgagttccgag
gacgggttcgccggaacagcgggcgtcgtccgggacatcaccgatcgcaaggagcgcgaa
cgcgaactcgagcgaacgacggaattgctcaaacaggccgaacgcctcgccggcatcggc
ggctgggaactcgacatcagcggggactcgcgggaggtgaccttcaccgacgggctgcgt
cgcctgtacgaactcccgtccgacgtgacgctcgattcggacctggcatcctcgttcccc
catccggaggatcgacctgccgtcctcgagatcgtcgacgcggcgctcgaggacggcgag
agctacgagatcgaacaccgcatgcagacggtcgcggggaacgagcggtgggttcagtcg
atcggcgagcccgtccgagcggacggccgccgatccggcggccagtccgacgacatcgtc
ggcgtccgcgggacgattcaggacatcaccgcgcacaaggaacgcgaactggcactcgag
tcgctccacagcgccgcccgcgatctgctcggaaccgagaccgatacggagatcgctgag
ctggtcgtcgacaccgccgcggagatcctcgacgccgctggcgtggccgtctaccggctc
gattccgacgtgaaccggttcgagccggtcgtctacacggacgggttcgagacgctctct
gacggtccgccgtcggtcgccgtcggcgacgacgattccgtcctctggaacgcctacgta
acgggaacggggaccgtggtcgacgatccgatgtcgttcgatcagtcgcgggtcttcggc
tcggcggtcgagagcggagccgtcgtcccgatcggcgatcacggcgttttcgcggtcgcg
tcgggcgagaccccgatcgacgccgacgcccggcgactgatcgagacgctcgtcgccacg
accgaggccgcgttcgaccgcctcgagagcgaggccagcctccgcgagcgggaagcggag
ctcgaggaacgaaaccggcggctcaaccgccagatcgagagcacggaactcatcaggcgg
atcgatcagttactcatcggggccgacagcagggccgaaatcgagcgcaccgttcccgac
cgcctgctcgaggctggcaacgtcgcgttcgcgtggatcgggaccctcgacgccagcggc
acgcggctcgagccccgcgcctgggccggacagcgacagacgtatttggacgacgtgtcc
ctcgagtacgacgcgtcgatggaacccgccgtccgaaccgcacgaaccgaaaccacgtcg
gtcgtctcgaacgccgtcgaggggctgcagggcgagggctggcggcgacatgccctggat
tgtgggttccagtcggtcatcagcgtcccgctgtcctacgcggagtacacctacggcgtg
ctcacggtgtacgccgacgagcccgacgcgttcggggacctcgagcggacggtgctgacg
gaactcggagcggggatcgcgaacgcgattacggcggtgaaaacgcgggaggcgctccac
gccgagcggttgctcgaactcacgctccggatcggcggcgcggacgatctgctctctcgc
atcgcgacggccacgggagcccgtgtcgagtacgaggggctcggctcacactcgaccgac
gagacgctgttgttcttcgaaacgagcggcgtcccggccgacgacgtgcggtcggtactc
gacgacctcgtctcggtcaccgactatcggctgctcaccgaggccgacgacgagtgtcgc
ttcgaggcgaccgtcgccggcgatgtcgtcgcctcgcggctggtccgccacggtgccagc
ccgcgctcgatgcacgcgaccgacgacggcatcgaggtgaccgtcgatgtcccgacggga
accgatgtccgtgagttcgtcgagacgcttcgggatcagtacgcgaccgtcgaactgcag
gctcgccaccacgtcgagcgctcgatgggaacggggagcgaactcgtgacttccctgttc
gacgccctcacggatcggcaactcgaggtgttgcggacggcctactttgccggcttcttc
gactggcctcgagagagcaccggcgaggagatcgctgcgatgctcgacgtgacgcagccg
acggtcaaccgtcacttgcggatcggccagcagcgggtgttggcacggttgttcgaggac
gaactgctgacgactggggagtga
DBGET
integrated database retrieval system
