KEGG   Natrinema pallidum: FGF80_01130
Entry
FGF80_01130       CDS       T06072                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
npl  Natrinema pallidum
Pathway
npl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:npl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FGF80_01130 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npl03400]
    FGF80_01130 (uvrB)
DNA repair and recombination proteins [BR:npl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FGF80_01130 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FGF80_01130 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB UVR ResIII DEAD AAA_22 UB2H AAA_30 DUF87 Cofilin_ADF
Other DBs
NCBI-ProteinID: QCW01926
UniProt: A0A4P9TBB7
LinkDB
Position
239926..241983
AA seq 685 aa
MSDAQGPLQPDRPDVDRPFEVDAPFEPAGDQPEAIEQLVDGFQSGMDKQTLLGVTGSGKT
NTVSWVVEEIQKPTLVIAHNKTLAAQLYEEFRNLFPDNAVEYFVSYYDYYQPEAYVEQSD
TYIDKDASINDEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPRNYIDMSLRLEVGEE
IGRDELLAQLVDLNYERNDVDFTQGTFRVRGDTIEIYPMYGRYAVRVELWGDEIDRMVKV
DPLEGTTQGEQRAVLVHPAEHYSIPETTLEEAMDEIRDDLDSRISYFERQGDMIAAQRIE
ERTTFDLEMMQETGYCSGIENYSVYLSDRESGEAPYTLLDYFPDDFLTVVDESHVTLPQV
RGQYAGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDQTLYVSATPSDYEREASGQI
VEQIVRPTHLVDPAIEISDATGQVDDLMDRIDEQIERDERTLVTTLTKRMAEDLTEYLEE
AGVDVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTMGRAARNVNGEVVLYADEPSNAMESAIEETQRRREIQQAFNEEHGNEPTT
IQKEIGETNLPGSKTDTSEVSGRELADEDDAARYIDDLEAQMQEAANNLEFELAADIRDR
IREVREEFDLAGEEDEGIAPPTEEF
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgagtgacgcgcaagggcctctccagccggaccggccggacgtcgaccgaccgttcgaa
gtcgacgcaccgttcgagccggccggcgaccagcccgaggcgatcgagcagctcgtcgac
gggttccagtcggggatggacaaacagaccctgctcggggtgaccgggtcgggtaagacc
aacaccgtctcgtgggtggtcgaggaaatccagaagccgacgctggtgatcgcccacaac
aagacgcttgcggcccagctctacgaggagtttcggaacctcttcccggacaacgccgtc
gagtacttcgtctcctactacgattactaccagcccgaggcctacgtcgagcagagcgac
acctacatcgacaaggatgcctcgatcaacgacgaaatcgaccgtctccgccactccgcc
acgcggtcgctgctgacccgcgaggatgtcatcgtcgtcgcgagcgtctccgcgatctac
gggctgggtgacccgcgcaactacatcgacatgtcgctgcggctcgaggtcggcgaggag
atcggccgtgacgaattgctggcccaactggtggacctgaactacgagcgcaacgatgtc
gacttcactcagggcacgtttcgggtgcggggcgacaccatcgaaatctatccgatgtac
ggccgctacgccgtccgggtcgaactctggggcgacgagatcgaccgcatggtcaaggtc
gacccgctcgaggggacgacccagggcgagcaacgggccgtcctcgtccaccccgcggag
cactactcgattccggagacgacactcgaggaggcgatggacgagatccgggacgatctg
gactcgcgtatctcgtacttcgagcggcaaggcgacatgatcgccgcccagcgcatcgag
gagcggacgacgttcgacctcgagatgatgcaggagacgggctactgttcggggatcgag
aactactcggtctacctctccgatcgcgaatccggagaggctccctatacgctgttggac
tacttcccggatgacttcctgaccgtggtcgacgagtcccacgtcacgctgccgcaggtc
cgcggacagtacgccggcgacaagtcccgcaaggactcgctggtcgagaacgggttccgg
ctgccgaccgcctacgacaaccggccgctcaccttcgaggagttcgaggagaagaccgac
cagaccctctacgtgagcgccacgccgagcgattacgagcgcgaggcgagcggccagatc
gtcgaacagatcgttcggccgacccacctcgtcgacccggcgatcgagatttcggacgcg
accggtcaggtcgacgatctcatggatcgcatcgacgagcagatcgagcgcgacgagcgc
acgctcgtgacgacgctgaccaaacggatggccgaggacctcaccgagtacctcgaggag
gccggcgtcgacgtcgcgtacatgcacgacgagacggacacgctcgagcgccacgagatc
atccgctcgctccggctgggcgagatcgacgtgctcgtcgggatcaacctcctgcgggag
gggcttgacatccccgaggtctcgctggtggctattctggacgccgatcaggagggattc
ctccggagcgaaacgacgctcgtccagacgatggggcgggcggcccggaacgtcaacggc
gaggtcgtcctctacgccgacgagccctcgaacgccatggagtccgcaatcgaggagacc
cagcgccgccgcgagatccagcaggcgttcaacgaggaacacggcaacgaaccaacgacg
atccagaaggaaatcggcgagacgaacctgccgggcagcaagaccgacaccagcgaggtc
tccggcagggaactcgcggacgaggacgacgccgcccgctacatcgacgacctcgaggcc
cagatgcaggaggctgcaaacaatctcgagttcgagttggctgctgatattcgcgatcgg
attcgggaagttcgggaagagttcgatcttgcgggcgaggaagacgaggggatcgcgccg
ccgaccgaggagttctga

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